Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1427 ATGCATATTATGCAGAAAAACCAAAGTAGCATTGGCAAAGCAATCATCCCATACATTTCAACTCAAATCTATGACCTCTCAACTCTCATTAATGTGCCAAAATATTTTGATGGTTACTTTGATATTACTACGTTCATGCATTTGATTCTCTTTCCTTCTTATAATAACACCCTCCCTCACTTCCTCTCTCTACAATCTTCAGCTCCACAACCTTCTCTTTCTGCTATGGCCTCAAAAGCTTTAACCACTGGTTCTCACTCCCGAAATGGATACCGTTTCTCAGTCTTTGATGACTCAGATGAGGAAAATGGAGACTGCAATATTCAACAGCAAAGGAAACATAATGATCGTGCTTTCTCTTTGGCTGGAAGTGTAGCTAGTAAGGATTTTGAAGAGCAGAAACCATTCAACTATAATGAAGAGAAAGGGAAAGGAAATCAAGAAAAGAGAAGTCTAATGAGCAATGACATAGGAGAGGATGAATTCCTTTTGGCTGAGTCGAGGCAACCATTATGTCGCAAAGTACCAATTGCTTCGAGCCTAATCAATCCATACCGCATAGTCATAGTCATGCGTCTCGTCGTCCTAGTTTTCTTCTTCCACTTCCGCATCACAACTCCTGTGCATGATGCATTTGCCTTATGGATAATCTCCGTGATTTGCGAAATATGGCTCTCTTTGTCTTGGGTAGTAGACCAATTCCCCAAGTGGTTCCCAATGACTCGCGAAACTTACTTGGAGCGCTTGTCCATGAGGTTCGAGCGCGAAGGGGAGCCGAACCTTTTAGCCGCAGTTGATGTCTTTGTTACCACTGCAGACCCTTTGAAGGAACCACCGATAATAACAGCAAACACTGTTCTATCAATCTTGTCTGTTGATTATCCCGTTGACAAAGTTAGCTGCTACGTCTCCGATGACAGTGCTTCCATGCTTCTCTTTGATACTTTGTCACAAACTTCTCAGTTTGCAAGAATATGGATTCCGTTTTGTAAAAAGTATAACATCGAGCCAAGAGCTCCCGAGTCTTATTTTTCTCAGAAAGTTGATTACTTGAAAGACAAGGTACATCCGACATTTGTAAAGGACCGCAGGGCTATGAAGAGAGAATATGAAGAATTCAAGGTGAGAATTAATGTACTTGTTGCAGAGTCTCAGAAAAAACCAGAAGAGGGGTGGGTGCTGCAAGATGGTACTCCATGGCCTGGGAATAACACTGACAATCATCCAGGAATGATTCAGGTGTGTCTGGGAAGTGCTGGTGCTGTAGACATTGAAGGCAAGTCACTGCCACGGCTTGTGTATGTTTCGCGCGAGAAATGTTCTGGTTATCAACACCATAACAAAGCTGGAGCAATGAATTCTCTGCTTCGAGTTTCTGCTGTGCTTAGCAATGCACCTTTTGTGTTGAATTTGGATTGTGATCAATACATCAATAATAGCAAGGCTATTAGGGAAGCTATGTGCTTCCTCATGGACCCTCTACTTGGAAAAAAGACAGCTTATGTCCAATTTCCACGAAGGTTTGATGGCATCGACGACAGTGATCGATATGCTAATCACAACAGTGTGTTCTATGATATCAACATGAAATGCCTTGATGGAATTCAAGGTCCAGTTTATGTTGGCACTGGATGTGTGTTCAACAGACAAGCATTATATGGCTATAAGCCACCAACCGAAAAAAGGCAGAAGACGGGCTTTTCATGCTGCTGCTGTTGTTCTGATGACTCTCGGTCAGAACTTGACTTTGAAGAGATTGATGATGTTTTTGAAGACAGTGATGAACAAGAGAAATCGTCCTTCATGTCCCTCAAAGTTTTTGAGAAAAAGTTCGGAGAGTCGCCAGTTTTCATTGCTTCTGCCTTGATGGAAGATGGTGGACTTCCAAAAGGCACTAATACGCAAATACTGGTGAAAGAAGCTATTCATGTTATAAGTATTGGCTATGAAGAGAAAACTGAATGGGGCAAAGAGATAGGGTGGCTTTATGGTTCAACCACAGAAGACATCTTGACAGGGTTTAACATGCATTGCAGAGGATGGAAGTCAGTTTACTGCATGCCGGAAAGAGCGGCTTTTAAAGGATCTGCTCCTATAAACCTATCAGACAGATTACATCAAGTTCTGAAATGGGCTTCAGGTTCAACTGAGATTTTCTTTAGTGGTTATTGTCCATTGTGGTATGGCTATAGTGGAAAACTTAAATGGCTTCAAAGGCTCGCTTACACGAACCACGTCGTTTATCCGTTCTCTTCCATCCCTCTTTTGGTATACTGCATGATTCCGGCTATCTGTCTTCTGACCGGAAAATTCATCCTCCCCACTCTAACAAGTCTTGCAAGCATTTGGTTGATGGCTCTATTTATTTCCATCATTCTAACTTGTGTGCTAGAGCTTCGTTGGAGTAAGGTTAACATTCAGGACTGGTGGCGCAACGAGCAGTTCTGGGTCATTGGAGGTGTTTCTGCACACCTTTTTGCAGTGTTTCAAGGCCTCCTTAAAGTTGCAGGACTAGACACTAATTTCACCGTGAGAACGAAATCAGCAGACAATGCTGCATTTGGACAGCTCCATGTCTTCAAGTGGACCACACTCCTCATCCCACCAACAAGTATTGTAATTTTGAATATGGTTGGAATTGTCGCTGGAGTCTCTGAAGCTATTAACAGTGGCTATAACTCATGGGGACTTTTATTCGGGAAGGTCTTTTTCTCTTTCTGGGTTATTGTTCACTTGTATCCTTTCCTCAAAGGTCTGATGGGAAGGCAAAACAGAACTCCTATCATAGTAGTTCTGTGGGCAACACTTCTAGCATTGATTTTCTCGATGATTTGGGTTCGAATTGATGTTTTCTTGCCCAAGAAAACAGGTCCTGTACTTTCACAATGTGGGATAGAATGTTGA 2904 0.4222 MHIMQKNQSSIGKAIIPYISTQIYDLSTLINVPKYFDGYFDITTFMHLILFPSYNNTLPHFLSLQSSAPQPSLSAMASKALTTGSHSRNGYRFSVFDDSDEENGDCNIQQQRKHNDRAFSLAGSVASKDFEEQKPFNYNEEKGKGNQEKRSLMSNDIGEDEFLLAESRQPLCRKVPIASSLINPYRIVIVMRLVVLVFFFHFRITTPVHDAFALWIISVICEIWLSLSWVVDQFPKWFPMTRETYLERLSMRFEREGEPNLLAAVDVFVTTADPLKEPPIITANTVLSILSVDYPVDKVSCYVSDDSASMLLFDTLSQTSQFARIWIPFCKKYNIEPRAPESYFSQKVDYLKDKVHPTFVKDRRAMKREYEEFKVRINVLVAESQKKPEEGWVLQDGTPWPGNNTDNHPGMIQVCLGSAGAVDIEGKSLPRLVYVSREKCSGYQHHNKAGAMNSLLRVSAVLSNAPFVLNLDCDQYINNSKAIREAMCFLMDPLLGKKTAYVQFPRRFDGIDDSDRYANHNSVFYDINMKCLDGIQGPVYVGTGCVFNRQALYGYKPPTEKRQKTGFSCCCCCSDDSRSELDFEEIDDVFEDSDEQEKSSFMSLKVFEKKFGESPVFIASALMEDGGLPKGTNTQILVKEAIHVISIGYEEKTEWGKEIGWLYGSTTEDILTGFNMHCRGWKSVYCMPERAAFKGSAPINLSDRLHQVLKWASGSTEIFFSGYCPLWYGYSGKLKWLQRLAYTNHVVYPFSSIPLLVYCMIPAICLLTGKFILPTLTSLASIWLMALFISIILTCVLELRWSKVNIQDWWRNEQFWVIGGVSAHLFAVFQGLLKVAGLDTNFTVRTKSADNAAFGQLHVFKWTTLLIPPTSIVILNMVGIVAGVSEAINSGYNSWGLLFGKVFFSFWVIVHLYPFLKGLMGRQNRTPIIVVLWATLLALIFSMIWVRIDVFLPKKTGPVLSQCGIEC* 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1427 967 Coils Coil 363 383 - -
Psa6g1427 967 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 78 967 - -
Psa6g1427 967 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 78 967 - -
Psa6g1427 967 SUPERFAMILY Nucleotide-diphospho-sugar transferases 279 763 IPR029044 -
Psa6g1427 967 Pfam Cellulose synthase 265 959 IPR005150 GO:0016020|GO:0016760|GO:0030244
Psa6g1427 967 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 378 557 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1427 Psa-Chr6 69263634 69269363 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1427 163 967 Cell Wall Biosynthesis AT5G17420 69.089 0.0 1217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1427 K10999 - gmx:100777278 1476.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1427 6 69263634 69269363 Psa6g1427 6 69263634 69269363 ECH