Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1422 ATGGCGAAAGAAAAACAACAAGAGAATGAAAACTCCGGAGGAATCCGAGTCCAAGGCATGCAGTTCTCATACGACGGACTACAACAACTACCACCGCTTTTCCTCGACTTCAACCTCCACGTCTCTCCTGGATCTCGATGCCTCCTCGTCGGTGCTAACGGATCCGGGAAGACGACTTTGCTCAAGATTTTGGCTGGGAAACATATGGTTGGAGGAAAAGACGTTGTGCGTGTGTTGAATTGTTCCGCTTTTCATGATACGCAGCTTGTTTGTAGTGGAGATCTTGCTTATTTGGGCGGATCTTGGAGTAAAAACGTTGGCTGCGCTGGAGACATTCCACTCCAGGGAGACTTCTCTGCAGAACATATGATATTTGGTGTCGAAGGCATTGATCCAGACAGGAGAGACAAGTTGATTGAGCTGCTTGATATAGATCTGCAGTGGCGAATGCATAAGGTTTCCGATGGGCAGCGGCGTAGAGTGCAGATCTGTCTGGGTCTTCTTCTTCCATATAAGGTCCTCTTGCTGGATGAGGTTACAGTTGACCTGGATGTTGTTACCCGAATGGATTTATTGGAATTCTTCAAGGAAGAATGTGAGCAGAGAGAAGCTACAATTGTATATGCAACTCACATTTTTGATGGACTAGAGACATGGGCAACTCATTTGGCATACATACAAGAAGGTGAACTAAGAAAAGCAGAAAAAATATCAGATGTTAATGAGTTGAAATCTTCAACTAATCTACTATCTGTTGTTGAGTCCTGGCTCCGTGCTGAAACAAAGATTGAAAAGAAGAAACCCGTCAACAATACATCTAATGCTCAAGGGAATTCATTCGCTAGCTCTCCATTCTTTTCATCCAGACACATGGCATATTATCGATAG 888 0.4414 MAKEKQQENENSGGIRVQGMQFSYDGLQQLPPLFLDFNLHVSPGSRCLLVGANGSGKTTLLKILAGKHMVGGKDVVRVLNCSAFHDTQLVCSGDLAYLGGSWSKNVGCAGDIPLQGDFSAEHMIFGVEGIDPDRRDKLIELLDIDLQWRMHKVSDGQRRRVQICLGLLLPYKVLLLDEVTVDLDVVTRMDLLEFFKEECEQREATIVYATHIFDGLETWATHLAYIQEGELRKAEKISDVNELKSSTNLLSVVESWLRAETKIEKKKPVNNTSNAQGNSFASSPFFSSRHMAYYR* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1422 295 PANTHER ABC TRANSPORTER I FAMILY MEMBER 21 4 295 - -
Psa6g1422 295 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 245 IPR027417 -
Psa6g1422 295 PANTHER ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED 4 295 - -
Psa6g1422 295 Pfam ABC transporter 36 69 IPR003439 GO:0005524
Psa6g1422 295 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 15 253 IPR003439 GO:0005524
Psa6g1422 295 SMART AAA_5 43 229 IPR003593 -
Psa6g1422 295 Gene3D - 14 274 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1422 Psa-Chr6 69079603 69084537 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1422 13 207 Calmodulin-binding Proteins AT2G36910 23.077 6.02e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1422 K12608 - gmx:100788503 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1422 6 69079603 69084537 Psa6g1422 6 69079603 69084537 ECH