Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1410 ATGGAAGGAGAAAGTAACAACAACAACAAAGAGAACAGTTCAGAGACATTATCATATGAAAATGAAGAAGAAACAAGCAACCATGATGTCTCTGAGGATCATCAACTTCAAAATCAACAATTTGGAAAAATTGAGGCCCAGTGGAATTGTTTGCCAAAACTACCTTATAGAAACGCTTTTGGTTTTAAACCGATTGGTTCTTCAAGTAATGACTATGGTACTAGGAAGCATGTTGGGTTTTGGAGAAACAATGGAGAAGAAGAAGAAGCGATTAAAGCTAAAACTGAAACTACTCAAAACCTTCTCAATGCTGAGTGTGATGCAACATGGCCAAGTGCTTCAGTCGGAGATAAACATAATGCTCTTTCTATAATTCCAAATTCAGGAAGCAGCTTCACAAAACAGAAAAGTGAGAAAACACGTTGCACTGACCGTCAACGCAGGCAACGTATCGCTGATAACCTCAAAGCTTTACATGAATTGCTTCCAAGTCCAGAAGTGGGTAGTCAAGCTCAAGCTTATATACTGGACGACATCATCGACTATGTTAAATACTTGCAGAATCAACTAAAGGAACTAAGTGGAAGCAAATTGGAAAGTGACTCAAATGCTATACCACTAGTTTTTCATGAGGGTTATGGGCATTATATAAAGGATCAAATGCTGAATGAGCCTCTCGAAGAGATAGCGGGGAAACTAGTTGAAGAACATTCAGCAGCAACAAGTCAGCTACTTGAAAGCAAAGGTCTTATTCTACTGCCTATTGCTTTGGTTGAAGATTTGAACCAAGATAGCTAG 798 0.3872 MEGESNNNNKENSSETLSYENEEETSNHDVSEDHQLQNQQFGKIEAQWNCLPKLPYRNAFGFKPIGSSSNDYGTRKHVGFWRNNGEEEEAIKAKTETTQNLLNAECDATWPSASVGDKHNALSIIPNSGSSFTKQKSEKTRCTDRQRRQRIADNLKALHELLPSPEVGSQAQAYILDDIIDYVKYLQNQLKELSGSKLESDSNAIPLVFHEGYGHYIKDQMLNEPLEEIAGKLVEEHSAATSQLLESKGLILLPIALVEDLNQDS* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1410 265 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 45 258 - -
Psa6g1410 265 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 127 194 IPR036638 GO:0046983
Psa6g1410 265 MobiDBLite consensus disorder prediction 1 15 - -
Psa6g1410 265 CDD bHLH_AtbHLH_like 143 194 IPR045239 -
Psa6g1410 265 Gene3D - 132 205 IPR036638 GO:0046983
Psa6g1410 265 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 135 186 IPR011598 GO:0046983
Psa6g1410 265 PANTHER TRANSCRIPTION FACTOR BHLH66-LIKE ISOFORM X1 45 258 - -
Psa6g1410 265 MobiDBLite consensus disorder prediction 1 34 - -
Psa6g1410 265 SMART finulus 141 192 IPR011598 GO:0046983
Psa6g1410 265 Pfam Helix-loop-helix DNA-binding domain 141 187 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1410 Psa-Chr6 68567177 68569142 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1410 131 262 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 34.211 6.95e-16 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Psa6g1410 HLH 6.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1410 - - mtr:MTR_1g072530 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1410 6 68567177 68569142 Psa6g1410 6 68567177 68569142 ECH