Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1381 ATGGGTAACGTGGACTATGATTATCCTCGTTCAGGTATGAACATGAACAACGTTAATGAGAGCCATGTTCATGTTCAACATCGCGTAGAGATTCCACCTCCGCAACCATTTTTGAAGTCTATGAAATATGCAATGAAAGAGACTTTTTTTCCAGATGATCCATTGAGAAAGTTTAAGAATCAGCCAGCTTCCAAAAAGTTGGTGCTTGGTTTTCAATATTTATTTCCAATATTTGAATGGGCACCAAACTACACATTCCAGTTCTTGAAATCTGATATCATAGCTGGAATCACTATTGCCAGTTTGGCTATTCCTCAAGGCATTAGCTATGCCAAACTTGCCAACCTTCCTCCAATTCTTGGATTATATTCGAGCTTTATACCACCATTGATTTATGCTATGATGGGAAGTTCAAGAGATTTGGCAGTTGGGACAGTGGCAGTTGGATCTCTTCTGATGGGTTCCATGTTGGCCACGGAAGTTAATCCAAACCAAAATCCAAGTCTTTATCTCCACCTTGCTTTCACAGCTACATTCTTTGCCGGTGTTTTGCAAGCTTCGTTGGGTTTCTTCAGGTTAGGGTTGATTGTGGATTTTCTGTCGCATGCGGCGATTGTAGGGTTCATGAGCGGAGCAGCCACGGTGGTTTGTCTGCAGCAACTCAAACCAATGCTAGGTCTTGAACATTTCACCCATGGTGCTGATCTTATATCAGTTATGCGTTCGGTTTTTACACAAGTTCATCAATGGAGATGGGAAAGTGCTGTTTTAGGATGTGTTTTCATTTTCTTTCTCCTTGTCACAAGATACTTTAGTAAAAGACAACCAAAATTCTTTTGGGTGTCAGCAATGACGCCGTTAGCGTCCGTTATATTGGGAAGTTTACTGGTTTATTTCACTCATGCAGAAAATCACGGCGTTCAAGTGATTGGAGAATTGAAGAAAGGACTAAACCCAATCTCAGTCACAGACTTGGTATTCGTGTCTCCTTATATGACCACATCTATCAAAACAGGAGTTATTGTTGGCATTATTGCTCTTGCGGAAGGAATAGCTGTGGGAAGAAGCTTTGCAATGTTTAAAAATTACCATATAGATGGCAACAAAGAGATGATAGCTATTGGAACCATGAACATAGTTGGTTCTTTCACCTCTTGCTACCTCACAACAGGACCATTTTCGCGTTCGGCCGTGAACTATAACGCGGGATGTAAAACAGCAGCATCAAACATTGTGATGGCAATTGCTGTCATGTTGACACTGTTATTTTTAACACCTTTGTTCTACTACACTCCTCTGGTGGTACTAGCAGCCATAATTGTGTCTGCAATGCTTGGACTTATAGATTATGAAGCAGCCATCCATTTGTGGAAGATTGACAAATTCGACTTTGTCGTTTGCGTTAGCGCATATTTCGGTGTTGTCTTTGGCAGTGTTCAAATTGGCTTAGTCATAGCAATTGTGGTATCAGTACTTCGGTTACTGCTATTTATCGCACGGCCAAGAACATCTGTTTTAGGAAACATTCCGAATTCTGCAATATACAGAAACATTGAGCATTATCCGAATTCAAACCGTGTTTCCGGAATTCTTATTCTAAAGATTGACGCACCGATTTACTTTGCAAATGCAAGCTATTTAAGAGAAAGAATCTCAAGATGGATTGATGAAGAGGAAGACAGAATTAAAGCTACAGGAGAGACAAGTTTGAAGTATATTATATTGGATATGAGTGCTGTTGGGAATATTGATACAAGTGGAATAAGTATGCTTGAAGAGATTAAGAAGATTTCTGAAAGAAGAGAGCAGCAACTTGTTTTGGTGAACCCTGGAAGCGAGGTGATGAAGAAACTAAACAAATCTCACTTTCAGAAGGATATGGGGGGAAATTGGATCTATCTGACAGTAGAAGAGGCTGTTAGAGCATGTAACTTTGTGCTCCATGGATGCAAAACGAATCCCAAAAGAGATGAATCAGAGGGTTGGAACAATGTCTGA 1998 0.4024 MGNVDYDYPRSGMNMNNVNESHVHVQHRVEIPPPQPFLKSMKYAMKETFFPDDPLRKFKNQPASKKLVLGFQYLFPIFEWAPNYTFQFLKSDIIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMGSMLATEVNPNQNPSLYLHLAFTATFFAGVLQASLGFFRLGLIVDFLSHAAIVGFMSGAATVVCLQQLKPMLGLEHFTHGADLISVMRSVFTQVHQWRWESAVLGCVFIFFLLVTRYFSKRQPKFFWVSAMTPLASVILGSLLVYFTHAENHGVQVIGELKKGLNPISVTDLVFVSPYMTTSIKTGVIVGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIVGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMAIAVMLTLLFLTPLFYYTPLVVLAAIIVSAMLGLIDYEAAIHLWKIDKFDFVVCVSAYFGVVFGSVQIGLVIAIVVSVLRLLLFIARPRTSVLGNIPNSAIYRNIEHYPNSNRVSGILILKIDAPIYFANASYLRERISRWIDEEEDRIKATGETSLKYIILDMSAVGNIDTSGISMLEEIKKISERREQQLVLVNPGSEVMKKLNKSHFQKDMGGNWIYLTVEEAVRACNFVLHGCKTNPKRDESEGWNNV* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1381 665 TIGRFAM sulP: sulfate permease 76 639 IPR001902 GO:0015301|GO:0016020|GO:0055085
Psa6g1381 665 SUPERFAMILY SpoIIaa-like 525 643 IPR036513 -
Psa6g1381 665 CDD STAS_SulP_like_sulfate_transporter 521 636 - -
Psa6g1381 665 PANTHER SLC26A/SULP TRANSPORTER-RELATED 2 663 - -
Psa6g1381 665 ProSitePatterns SLC26A transporters signature. 118 139 IPR018045 GO:0008271|GO:0008272
Psa6g1381 665 Gene3D STAS domain 500 645 IPR036513 -
Psa6g1381 665 PANTHER SULFATE TRANSPORTER 2 663 IPR001902 GO:0015301|GO:0016020|GO:0055085
Psa6g1381 665 Pfam Sulfate permease family 89 469 IPR011547 GO:0016021
Psa6g1381 665 ProSiteProfiles STAS domain profile. 520 643 IPR002645 -
Psa6g1381 665 Pfam STAS domain 521 639 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1381 Psa-Chr6 65887521 65892339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1381 27 665 Inorganic Solute Cotransporters AT4G02700 67.812 0.0 901
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1381 K17471 - gmx:100787694 1109.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1381 6 65887521 65892339 Psa6g1381 6 65887521 65892339 ECH
Psa3g1458 3 133628607 133634203 Psa6g1381 6 65887521 65892339 PCT