Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1377 ATGCAAACTAATCCTGCATTTACAATAATCAAACATGCTGCACTTGGTGAATTTAAGAAAGACAAAGCTAATGAGCCTGTTGTTATTTGCTTGAAAGTTGGTGACCAGAAGTTTGTTTTGGGAACCCTCAACAGAGAGAAAATTCCTCAGACTACTCTTGAGTTGGTTCTGGACGAGGAATTTGAACTTTCTCACAGCTCCAAAATATCCAGTGCCCATTTCTGTGGATACAAAGCTTATTACCCTGACAATGAATATAGTGATGAAGATGACTTTTCTGATAGCGATAAGGAGGAAATTCCTTTGGCTCGAACCATAGGGAATGGGAAACCAGAAATAAAAGTTGAGAACCAGAAAGTTTCTGAAGCTAAGAAAGCACCTGCTAAGAGTGGTGTACATGCCAAGCCTGAACCACCTGCTAAGAGCGATACATCTGCGAAACAAATTGTACATCAGTTCAATAACAATGTTAAACCAGATCATGTAACAATGGTAGCAGTTCTAAACAGACCTGCAAAGATTCATTTCAACCCTTCAAGAACCAACTCCAATTACAACCAACCCTCACAACCATACAAGCACCCTGCACAAACCCTCAAACCACAGTTTCCAGCACCGTCTGAATCACACAAACCCTGCCACACTGGACGAATAGAAGCAGACATAATAAATCCAAATAAGGTTTTTCAAAACTCAATCCAACCAAGAGGTCCAACAGCTTCGATGATGAAAATGTGA 738 0.4038 MQTNPAFTIIKHAALGEFKKDKANEPVVICLKVGDQKFVLGTLNREKIPQTTLELVLDEEFELSHSSKISSAHFCGYKAYYPDNEYSDEDDFSDSDKEEIPLARTIGNGKPEIKVENQKVSEAKKAPAKSGVHAKPEPPAKSDTSAKQIVHQFNNNVKPDHVTMVAVLNRPAKIHFNPSRTNSNYNQPSQPYKHPAQTLKPQFPAPSESHKPCHTGRIEADIINPNKVFQNSIQPRGPTASMMKM* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1377 245 Pfam Nucleoplasmin-like domain 8 68 IPR041232 -
Psa6g1377 245 PANTHER HISTONE DEACETYLASE HDT1-LIKE 11 141 - -
Psa6g1377 245 MobiDBLite consensus disorder prediction 118 145 - -
Psa6g1377 245 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 11 141 - -
Psa6g1377 245 Gene3D Nucleoplasmin core domain 2 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1377 Psa-Chr6 65347089 65347981 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1377 10 78 C2H2 Transcription Factor Family AT3G44750 50.725 4.10e-14 67.8