Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1371 ATGAGATCAGAGTGCACCTCTTCATCTTCCTATTCATTAGCAGATTTAATTATTGATGCTGCCTTTGAAAAGGGCAGTATGGACAATATGGCAGCAGTTGTTGTTCCTCTGGAATCGGCCAACTCTTCTGGGAACTCGCTTAGAAGAAGCTACACTGAAAATGGTGATACAGGTTTCCCATTATTTGGTCTGCAGGAATCTGCTTACAGAAGCTCAGCTAATGATATCACTTCCGATCTATTGCACCTGGAGCGCACCCGTCTGCAAGATACCAAGTTTAAGCGAATATTGGTTGAAGTGAAACATGGTGATTTTGGATGTTTTTATTTAGCAGAAAATCTTGATGATTCAGTGGAATCTAAATGGCCGGCCAAAAAAGATGACTGGGAAAACTATTTGTATGAACTACCCCAGCCTCTACCAAACGGCTTTCATCAACAAGCTGAAGTAGATGGCCCTATAATTTTGTACAGCGACCAAAACTTCTGCTTTTATCTGAGTTCAACTATCAATGATGCCAAAGACCAATGCATAAATCCTGAAGGCTTTGCCAGTTTTATTGGTCTTCTTGAATCAATTCCTTTACATGATACAGGTTCAGATAATGCTTCTTCTGACTATTCGATGCCTGATTCAAGGTATGTACTAAGGAGGAGTTTTGGTCGTGGATCATATGGTGAAGTATGGTTGGCTTTTCATTGGAATTGTAATCAAGGTAATATTACTGCAGAAATGAGCAAGGGCGACAATAATAGGAACAGAAGCTCAAGTAATCCTGAGTGTCAGGATGGTCCTTCTAACTACACCCTGTACATTTTGAAACGTATAATGGTAGAGAAAGGGTCTGCTGTGTACTTAAGTGGACTGAGGGAAAAATATTTTGGCGAAATTTTCTTAAATGCCTCTATGTGCTATGAAGATGTGCTATTGGGTGGAAAATCAAACTGTGTATTTGAAACATCACAATATGATTCTGAGTATTCATTTCAAGACAAATTTCGACTGCACGGTGCCATATATGAAGAAGGTTTGAACCATATTGCAAGATATGTGGAATCTTTTGAGTCTCGGTCCAATGAAATATGGCTTGTATTCAGTTATGAAGGAGTGTCATTGTCAAAGCTTTTATATACTGTAGAAGATGCAAACAATACAGCTGAGAAAGAAAGACTTGAGCAAGTGAAACAAGTTCAGATACTACATCCATCAAAGTGGTGGCGTTGGGTGAAAACCACAGAAGAAGGGCAAGAAGAAATGCGCAACCTTATCTGGCAACTGTTGTTGGCACTCAAGTCTTGTCACGACCGCAATATCACACACAGAGACATTAAACCTGAGAATATGGTGATATGCTTTGAAGATCCGGAGTCAGGGAGATGCTTGAAAGACACTCCAACAAAAGTTAATAGTTTTTCCACCAAAATGCGTATTATTGACTTTGGAAGTGGAATTGACGAATTCACAATAAAGCATTTGTATGCTTCTACTGGGCCTACTAGAGCTGAACAAACTTACGAGTACACACCTCCTGAAGCCTTGCTAAATGCTACATGGTATCAAGGGTCAACAAGCTCAAATTTGAAGTATGACATGTGGAGTGTTGGTGTTGTGATGTTAGAGATGGTCTTAGGGACACCTAATATTTTCCAGATAAATGCTTTTACACGTGCTCTTTTGGACCGCCATCTTGAGGGCTGGAACGATGGTGTGAAGGAGCTGGCATACAAATTTAGATCATTCATGGAATTGTGCATCTTAATCCCTGGGGTTTCTGGCAGTTACTCAAAAAAGTATCACAAAGCTAATCAAGTTGGAGTTTCGCCTGCATCCTGGAAATGCTCTGAAGACTTCTTTTCTAAACAAATTAAGGCTAGAGATCCTCTTAAAATAGGTTTTACAAACATTTGGGCTTTACGGTTAGTGCGCCATCTGCTACAATGGGACCCGGAGGACCGGCCAAGTGTTGATGAGGCACTGCGGCATCCCTATTTCCAACCTCCGCCAAGAGGATAA 2013 0.4064 MRSECTSSSSYSLADLIIDAAFEKGSMDNMAAVVVPLESANSSGNSLRRSYTENGDTGFPLFGLQESAYRSSANDITSDLLHLERTRLQDTKFKRILVEVKHGDFGCFYLAENLDDSVESKWPAKKDDWENYLYELPQPLPNGFHQQAEVDGPIILYSDQNFCFYLSSTINDAKDQCINPEGFASFIGLLESIPLHDTGSDNASSDYSMPDSRYVLRRSFGRGSYGEVWLAFHWNCNQGNITAEMSKGDNNRNRSSSNPECQDGPSNYTLYILKRIMVEKGSAVYLSGLREKYFGEIFLNASMCYEDVLLGGKSNCVFETSQYDSEYSFQDKFRLHGAIYEEGLNHIARYVESFESRSNEIWLVFSYEGVSLSKLLYTVEDANNTAEKERLEQVKQVQILHPSKWWRWVKTTEEGQEEMRNLIWQLLLALKSCHDRNITHRDIKPENMVICFEDPESGRCLKDTPTKVNSFSTKMRIIDFGSGIDEFTIKHLYASTGPTRAEQTYEYTPPEALLNATWYQGSTSSNLKYDMWSVGVVMLEMVLGTPNIFQINAFTRALLDRHLEGWNDGVKELAYKFRSFMELCILIPGVSGSYSKKYHKANQVGVSPASWKCSEDFFSKQIKARDPLKIGFTNIWALRLVRHLLQWDPEDRPSVDEALRHPYFQPPPRG* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1371 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672|GO:0006468
Psa6g1371 670 ProSiteProfiles Protein kinase domain profile. 214 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g1371 670 SMART serkin_6 214 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g1371 670 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 73 668 - -
Psa6g1371 670 Gene3D Transferase(Phosphotransferase) domain 1 402 665 - -
Psa6g1371 670 PANTHER PROTEIN PHOSPHATASE 2C 73 668 - -
Psa6g1371 670 SUPERFAMILY Protein kinase-like (PK-like) 209 666 IPR011009 -
Psa6g1371 670 Pfam Protein kinase domain 409 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1371 Psa-Chr6 64586974 64607877 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1371 278 668 PP2C-type Phosphatase Gene Family AT3G63340 64.194 4.36e-180 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSKL Psa6g1371 Pkinase 1.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1371 - - lja:Lj5g3v1003920.1 1095.88