Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1352 ATGACGAAGACGGCAAGCATAGACATGGTAACTGATGAGAATCTGGAAAAACATATTCACAAACACATGGGGTGCATGGCTGGTTTTCTTCAAATTTTCGACCGGAATCATATTCTCTCCGGCAAACGCATCTACTCCACCAAAAGACTCCCGCCGCCATCGCCTGAAACACCACGGAAAGACGGTGACGGTGACGGTGGCGGTGGCTCACCGACGCTATCAGTACCGTCTCCGGTTAAAGAGGTCCAATGTGTAACAAAACCAGTCCTCCCTGTTCTGGAACTCAAGGAAGGTACAAGATCTTCATGGAAATTCTCAAGAGAAGCTCCTAGACTCTCCCTCGATAGCAGAGCAGTGGTGGATGCCAAAGGAGCGCTTCACCCGAGAGAGATCCGAACAAACACAACGGTAAACCCCGAAAACGACGGCGACAAACAGCGTCGTTCCACAAGCAGCGTAATCGTCAGACTCATGGGTCTTGACTCGTTACCAACGGATTCCGTTGCAAAGCTACAAAGATCCGTTTCCGAGTCCAGAGTTTCCAGAGATCCGTCCAACAATTACACTCAACAACGGAGTAATGCTGGCTCTGGCTTGGGCCAGATGAATAATCATAATCATAATCAGAATCAGAATAAAACTAATTCTAATGTTGTTAATGTTCATGCTACTAATAATGCTAACATTGTTAATTCTTATTCTTATGGTACACTCGATGATAATCGATTGTGGAATGGTAGAGTTGCAGAGGGAGGTAGAGGGAAACAGAATCAGAATAAGGGAACAGTAATGGTGCAGAAGAAGAGTTTCTACGACTCTGCAGATTTCTTCCCTGAACCGAAGCACAATGTTTCAATCTCCGATGAGATAGAGAAAAGGTTGAAGATGCGTGGGATTAATCAACCTTCTCAAGATCTCGACACTCTGAAGCATATCTTAGAAGCTATGCAGCTTAAAGGTCTTCTTCGTTCCTACAAATCAAACCAATCTCCCATTGTGTTAATGAAACCACTCAGATCTTCTCGGCACGAGCGGTTTGAACGGTTCAATCGAACCGGTTATGATTCTCCACCTCCGCATTCTTCGGTTCGGTCCAATTCTCCAGCTCGCCGGAACTTAAGTCCGAGATTTTCCGGCGAGAATGACCGGGCTCAAGTTAGTTCTAGAAACTCGAGTCCGAACCGGAGGAATGTCAATGTCCCAAACATGGAGACACGGAGGAGAGTCAGTAACGAGGGTGTTGATTCTAGAAGAGTGTCTCCTGTTCATTCGCCTAAGATAAGTTCAAGAAGAAATGCAACGGCTCCGATAGTGACAGGTGGATCTCCCAGGATGAAAAGAGTGATTGATCCTAAGGTGAAAATGTTGGGTGTAGGAGATGATGAATGGTCCACAGTTTCAGAAAATAGCTTCACCACTATTAATTCTCATACCGATTCAGAGAGGTATAAATTGGAAGAGTACAAAGAAGGAAGGAGTCTGCTGGATAGATGTGACAAATTGCTGAACAGCATAGCGGAGATTACAGCATCTAACGAGTTACAACCGAGTCCTGTTTCAGTTCTTGACCCGTCTGTTTACAAGGACGAGTGGTGTTCACCTTCACCAATTACCAAAAGAAACATTGATTACAGTTTCAAAGATCAAGTGGCGGAATTTGAAGATGAAATGTGGAGTGGAGGTGAAGGAAAATCCGAGGAGGAAACCAAATCAGAGGATTCTGATTTCCTTTATTTTTCAAAGATTCTGCGTGCTTGTAGTTATTATCCAGAAGATTGTGACATTTTTGTTTTACTTGAGAAGCAACAATTTCTGAAGGGGACGGAAACTTCAAAGGCGTCTACGTTGCAGAGGCGGTTAATATTCGACACGTTACAGGAAATTCTAAACCGGAACCAAAGGTTGCCGCCGTGGAAGGTGGTGTCTCAGGGAGAGGAAACACAAAAGATCTGGTCGGAGTTTCAGAGGATACGAGAAAGGGAGGAGTCTGAATCGGAGGACTTGTTTGGAGTGATATGTGGTGTGTTAAAGAAGGACATGGCGGAGGAGGTGAGTGGTTGGAGTGAATGGACGGTGGAGATGGGAGATTTAGTTTTGGACATTGAACGGCTGGTATTCAAAGATTTGATCGGTGAAACTATACAACATCTTGCTTCATTTCCACCACAATGTAACAGATTAGGGGCGCTTCGTAGACAACTTGTATTTTGA 2211 0.4469 MTKTASIDMVTDENLEKHIHKHMGCMAGFLQIFDRNHILSGKRIYSTKRLPPPSPETPRKDGDGDGGGGSPTLSVPSPVKEVQCVTKPVLPVLELKEGTRSSWKFSREAPRLSLDSRAVVDAKGALHPREIRTNTTVNPENDGDKQRRSTSSVIVRLMGLDSLPTDSVAKLQRSVSESRVSRDPSNNYTQQRSNAGSGLGQMNNHNHNQNQNKTNSNVVNVHATNNANIVNSYSYGTLDDNRLWNGRVAEGGRGKQNQNKGTVMVQKKSFYDSADFFPEPKHNVSISDEIEKRLKMRGINQPSQDLDTLKHILEAMQLKGLLRSYKSNQSPIVLMKPLRSSRHERFERFNRTGYDSPPPHSSVRSNSPARRNLSPRFSGENDRAQVSSRNSSPNRRNVNVPNMETRRRVSNEGVDSRRVSPVHSPKISSRRNATAPIVTGGSPRMKRVIDPKVKMLGVGDDEWSTVSENSFTTINSHTDSERYKLEEYKEGRSLLDRCDKLLNSIAEITASNELQPSPVSVLDPSVYKDEWCSPSPITKRNIDYSFKDQVAEFEDEMWSGGEGKSEEETKSEDSDFLYFSKILRACSYYPEDCDIFVLLEKQQFLKGTETSKASTLQRRLIFDTLQEILNRNQRLPPWKVVSQGEETQKIWSEFQRIREREESESEDLFGVICGVLKKDMAEEVSGWSEWTVEMGDLVLDIERLVFKDLIGETIQHLASFPPQCNRLGALRRQLVF* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1352 736 PANTHER OS11G0587300 PROTEIN 9 736 - -
Psa6g1352 736 PANTHER LONGIFOLIA PROTEIN 9 736 IPR033334 GO:0051513
Psa6g1352 736 Pfam Domain of unknown function (DUF4378) 590 712 IPR025486 -
Psa6g1352 736 MobiDBLite consensus disorder prediction 350 432 - -
Psa6g1352 736 MobiDBLite consensus disorder prediction 355 406 - -
Psa6g1352 736 MobiDBLite consensus disorder prediction 168 192 - -
Psa6g1352 736 MobiDBLite consensus disorder prediction 44 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1352 Psa-Chr6 63460406 63463635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1352 103 736 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 36.719 2.54e-98 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1352 - - mtr:MTR_1g071070 1062.75