Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1302 ATGGAACTCCAATTATTGGTTTCATGGTTACTTTTCTCTGCATCTCTCGTTTGGTTTTTACTCTTAGCCACAAAAACAAAATCCAAATCCCAAAAAGCACCTTCCTCTACCACCAACACCACAATTCCTAAATCTTATCCCATTTTCGGTTCTGCTTTCTCTTTGGCAGCCAACTTCCACCGACGCGTGCAATGGACCTCCGACATTCTCCAAACCATCCCTTCCTCCACCTTCGTCCTCCACCGCCCTTTCGGCTCCCGCCAAGTCTTTACGGCTCAACCTGCCGTGGTGCAACACATTCTCAAAACCAATTTCCCTTGCTACGGTAAAGGTTTCACGTTTTACCAATCCATCAATGACTTACTCGGTGACGGAATCTTCACCGTCGACGGTGATGCATGGAAGTTCCAACGACAAATCTCCAGCCACGAATTCAACACTAAATCCCTCCGGAAATTCGTTGAAACGGTAGTTGATGTTGAACTCTCCGATCGCCTCCTCCCTGTTCTCTCCGAAGCTTCTTTAAACCAAACCACTATTCTTGATTTCCAAGACGTCCTGCAGCGTTTCACCTTCGATAACATTTGCATGATCGCTTTTGGATACGATCCAGAGTATCTCCTCCCATCCCTTCCTGAAGCACCGTTTGTAAAAGCCTTCGATGAAAGCACGAGACTCAGCATCGAGAGGTTAAACGCCGTGATTCCATTACTATGGAAAGTGAAAAAAATCCTGAACATCGGATCGGAGCGACGGCTGAAAGAAGCCGTCGCAGAAGTAAGAGGACTGGCCACAAAAATTGTTAGGGATAAGAAAAAAGTGCTTGGAGAAAAATCAGCGTTGGAATCGGTGGATCTTTTATCGCGTTTCTTAAATTCTGGACATTCAGATGAATCTTTTGTTGTTGATATTGTAATAAGCTTTATTCTTGCTGGGAGAGATACAACTTCAGCAGCACTCACATGGTTCTTTTGGTTACTCTCTAAGCATACTCATGTGGAGAATGAGATTCTCAAAGAGATTACCGGAAAATCGGAAACGGTTGGCTACGATGAGGTGAAGGATATGGTTTACACTCACGCGGCGCTATGCGAGAGTATGAGGTTATACCCTCCTGTTGCGGTGGATACTAAATTAGCGGCGCACGAAGATGTTTTGCCAGATGGGACTTTAGTGAAGAAAGGGTGGAGAGTGACTTATCATGTATATGCTATGGGAAGATCTGAGAAGATATGGGGACCGGATTGGGCTGAGTTTCGACCGGAGAGGTGGTTGAGTCGGGATGAGGTTGGGAAGTGGAGCTTTATTGGGATAGATTATTATAGATATCCGGTTTTCCAGGCTGGACCGAGGGTGTGTATAGGGAAGGAAATGGCATTCTTGCAGATGAAGAGGGTGGTTGCCGGGATTATGGGGCGGTTTAGGGTTGTTCCGGCGATGGATGAAGGGATTGAGCCGGAGTACACTGCCCATATTACATCATTAATGAAAGGCGGCTTTCCTGTAAAGATAGAAATGCGAAGCCACTCATGA 1533 0.4592 MELQLLVSWLLFSASLVWFLLLATKTKSKSQKAPSSTTNTTIPKSYPIFGSAFSLAANFHRRVQWTSDILQTIPSSTFVLHRPFGSRQVFTAQPAVVQHILKTNFPCYGKGFTFYQSINDLLGDGIFTVDGDAWKFQRQISSHEFNTKSLRKFVETVVDVELSDRLLPVLSEASLNQTTILDFQDVLQRFTFDNICMIAFGYDPEYLLPSLPEAPFVKAFDESTRLSIERLNAVIPLLWKVKKILNIGSERRLKEAVAEVRGLATKIVRDKKKVLGEKSALESVDLLSRFLNSGHSDESFVVDIVISFILAGRDTTSAALTWFFWLLSKHTHVENEILKEITGKSETVGYDEVKDMVYTHAALCESMRLYPPVAVDTKLAAHEDVLPDGTLVKKGWRVTYHVYAMGRSEKIWGPDWAEFRPERWLSRDEVGKWSFIGIDYYRYPVFQAGPRVCIGKEMAFLQMKRVVAGIMGRFRVVPAMDEGIEPEYTAHITSLMKGGFPVKIEMRSHS* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1302 510 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1302 510 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1302 510 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1302 510 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1302 510 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1302 510 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1302 510 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1302 510 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1302 510 Gene3D Cytochrome P450 27 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1302 510 Pfam Cytochrome P450 43 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1302 510 PANTHER CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE 8 505 - -
Psa6g1302 510 PANTHER CYTOCHROME P450 8 505 - -
Psa6g1302 510 SUPERFAMILY Cytochrome P450 43 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1302 Psa-Chr6 57631599 57633987 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1302 3 509 Cytochrome P450 AT3G48520 46.575 1.69e-149 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1302 K20769 K20768 ag:AAG33645 909.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1302 6 57631599 57633987 Psa6g1302 6 57631599 57633987 ECH
Psa3g1389 3 125049892 125051966 Psa6g1302 6 57631599 57633987 PCT