Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1257 ATGCAGATTACTACATTAATCGATGTTATCGCTGATCGTCACGAAGTTGCTCCTTTAATCAAACTCACTGTTTCTGACCATGCTAATAGCAGTGATCATGAACTTCCACCTAAACTCGATCTTTCTTACGAAGAATTAGGATCTAAGTTAGTGAATTTTGCTAGGTTAAGAAATGTAACATTGGAATTCAGAGTAGTTTCTTCAAGTTACACAAATGATGAAACCCTATCAAATTCAAACTCTTATGTTTATGAATCTATATCGTCTTCTGCTGCTACTACTACTATTACTTCGCTAAGATCGTTGTTTCATAAGGCGCTTCGAGGTCTAGATCCAACACTTGTTGTTTTAGTAGACGAAGATGTTGGTTTAACTTCAAGTAACTTGGTTAGTAGATTAAGGTCAGCATTTAATTATCTATGGATACCTTATGATACTGAGGAGACTTTTCTACCACGCGGAAGTAAACAAAGGCAATGGTATGAAGCTGATATTTGTTGGAAGATTGAGAATGTGATAGATCATGAAGGTGTTCAAAGAGTTGAGAGAGTTCAAAGAATGAGAAATGCAAATTTTCAAGGGGTTGGATTTGGTGAGGAATGTGTTGTTGAAGTGAAACCTATGTTTGATGAACATGTTGCTGGATGGGGATTGAAGAAAGAAGATGAATGTATTGTGCTTACATGGAGAGGTCATAATGTATTGTGCTTACATCCATTAACCAAGTCAACAAATTTCTTTGAGAATTGA 750 0.3587 MQITTLIDVIADRHEVAPLIKLTVSDHANSSDHELPPKLDLSYEELGSKLVNFARLRNVTLEFRVVSSSYTNDETLSNSNSYVYESISSSAATTTITSLRSLFHKALRGLDPTLVVLVDEDVGLTSSNLVSRLRSAFNYLWIPYDTEETFLPRGSKQRQWYEADICWKIENVIDHEGVQRVERVQRMRNANFQGVGFGEECVVEVKPMFDEHVAGWGLKKEDECIVLTWRGHNVLCLHPLTKSTNFFEN* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1257 249 PANTHER SCARECROW-LIKE PROTEIN 32 1 237 - -
Psa6g1257 249 Pfam GRAS domain family 1 235 IPR005202 -
Psa6g1257 249 ProSiteProfiles GRAS family profile. 1 241 IPR005202 -
Psa6g1257 249 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 237 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1257 Psa-Chr6 54751803 54752651 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1257 1 235 GRAS Transcription Factor Family AT3G49950 49.425 5.18e-77 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Psa6g1257 GRAS 5.8e-31 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1257 - - cam:101509453 329.331