Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1221 ATGAAAGGGCGGTCAAATCGCCCTCAGAATATGGACCCTCCGCCGGACGAATGGGTCGACGGTTCATGGACGGTGGACTGCATCTGCGGCGTTACCTTTGACGACGGCGAAGAGATGGTAAAGTGCGACGAGTGCGATGTGTGGGTTCATACGCGCTGTTCTCGATACGTTAAGGGTGATGACATGTTCGCTTGTGACAAGTGCAAGGCCAAAAACAACCGTGCCGGAGCTGACAACAACACTGAGGAAACTGAGGTTGCTCAATTATTGATCGATCTTCCCACAAAGACGATCTCTCTTGAGAGAAGGAATAATAACAAAAGCACTTCTATTTCTTCCAGAGTTGCGTCTTGTTCTCGCCGTCCTTTTAAGCTTTGGACTGATATACCTATGGAGGAGAGGGTTCATGTTCAGGGTATCCCTGGTGGTGATCCTTCTCTTTTTGCCGGTAAGACAGTGTCTTCGATTTTCGGTCCGCAGCTGTGGAAATGCACTGGTTATGTTCCTAAGAAGTTTAATTTTCAGTATAGGGAGTTTCCTTCTTGGTATGAGAATGAGAATGATTCAGATAAGGGTGCACAAGAAAATGATACTGATATTAAGGATAAGGATAATGGGGCTGGAGTTCTTTTATCATTTTCTAAAGAGACTAATAACATGTTACCCACATCCCCTGTTGCCGCTTTGGTTGATATGAAATCAAGCCAGGGTAAGAAGGGTTTCAAGGAAAATGGAACGGGCAAGGTTGGCAAGGATCATATGCCTCGCGTCCACAATGCGGTCAAGAAGGAGAGGACTTCGGTTAGCCCTTTTGTTGTTCATTCGAGTAAGCGTAGGAAGGATGAGTTCTCCAAGGACCGGATTGGGAAGAAGAAGCGGGTCAAAACTTCTGACAAAGAGGAGAGGAGGACTTCTGACAGAGAGGATGTAGATCCCAGGAGGAAGACTTCTGATAGGGAGGATGTAGATCCCAAGAGGAGGACTTCTGATAGAGAGGATGTAGATCCCAAGCGGAGGACTTCACATTCTTCTAAAACAGCGTTTACATCAACCAGTGATGCAAAACAATTGCCATTTTATGGAGGCAGAGGTCCGAAGGTTTTCAAAGATGACATTCGAAACATAAAGAATAAAAACGTAAAAGACTCGGTGGCTCGAGATCATATCTCTAATGATTCTTTTGCCGGGGGTATCATCATGGAGGCATCAATTAACAACAACGTGACAACTACTGAGGAGTCTTCAGAAGCCTTATATCCTAACAAAACAAGACAAAGTCATTCTGCTGGAGATGTATTAGTAGAAGGGAAGACTGGCCATAAAGTTCTTGAGATGTCTTCTAAGACTGATGATGCCGTTACATCAGTTCTAAAGCATACTTATCTTGAAAATGCCTCAGCTAAAAAGAAGGGCGGAGATTGCTTGGAAGCTAACCATGTAGATGATACTTTAGTAAGAAGCCATGCGAGTCCTCAGACAGAAGATCATTGTGGCTCTGCACCAGAACATATGGGAAAGCAAGTTTCTCAAGATATTGATTGCAACCAGAATCCAAGCTCTGGACAATGCAAAGTTAAGGTGAAGAGAGAAGAAGATGACGATGATAAGTTTAAACTTTCAAATTTTCATTCTTCTCCCATCAGCGGTCTTAAAAACAATGGAAAGCCATCCAATCCCACATCTGTTATTGATAAAGTCAATGATGCTGCAGTTCTCAGTTTACCTTCATGTGAAGGTAAGGTAGGCAATGTTGGCATATCATCAGAAGTACTCCTTGATAATCATACCAACAAACTCAATGAATTGCCCGGTGATTTTTGTCGTGGAAAAGAAGAAGTGGAAGGGTCTGAAGGTTCATTGGAAACACAAAAGGGATTTTCAAAAACCAAAGATGGTCTGGGCTCTGCTAAGAATCCATCTAAATCTGAAACACTTGAATGCCCTAGTAAAATGCTAGCTTCTGTTGGAAAGTTGTCTCCAACTTCATCTACCATGAACTCCAAATCATTTAGTCAGGACTTTAAATCTGAAGATACCGAAATTGCTAATCCTTTTACGAAGCATGGAGCTAAATCTGATCGTAACAATTACATAAAGAGTGAAAGTTGTATGAATGATGCTTCAATGGATGAAATTCCAAGGAAGTCTGTAAGAGAGCGTCCAAAATCCTCGTTGAATCATAATTCAAAAGGACTGCATTCAAGCCGGAGTATGCAAAATTCTGTTTCGAAGCAAGTAAATCCAGATGCGAGAGATTCTGTTCACTGTTCATCAACGAAACCATCCTCAGGTCAACAGACTCCAAATGTTTTTGGCTCTAGTGAGAGTAATGCATCAATACACCATCAAAAAGGACCACAAGTGCAGAATAAGATATCATCTTCAGCGCCACAGAAAGTAGAAAAGCTTAATCAAACAAATGCCCATCCTTCCTCGAAGTTGAACCAGAACAATACACCATCATTGAATCCTTCTCCAACATTAAATTCTTCAATGCTGAGTGATGAAGAGCTAGCTTTGCTATTGCATCAAGAATTGAATAGTTCACCTCGTGTACCCCGGGTTCCCCGTGCACGCCAAACAGGTAGCTTGCCACAGCTGACTTCTACCAGTGCTACAAACATGTTAATGAAGCGAGCTTCGGTTGGAGGAAAGGATAACTATTTGGTATGTAAAAGAAAATACAAGGATGCAACTAGGGATGGGGTTTGTAGTTCTCGTGAACCAGAAGATGAAACTAAAAGGATAGAGAAGGAGAAAGTTCAATCATCATCTGATCAGAGAAAACATGACATGGCATATATGGAAGATGCTTCTGTAAAGGAAGAAGGAAGCCATGCATGCGTGACAACTGCAAACTCTATTACAAGCAATGTTGTTTCCACAACCCCTGCCACTGAAAACAGCAACCCACTTTCCCCTGGTGAGGATTGTAATTTATCATCAATGAGGAACTCACCCAGGAATATATCTGATGATGATACAGCAACACCTGGAAGGCCAGTTCATCACACCTTACCTGGCTTAATCAATGATATAATGAGCAAGGGCAGGCGCATGACATATGAGGAACTCTGTGGTGCTGTGTTGCCGCACTGGCCTAACTTGAGGAAACATAACGGAGAGCGATATGCATATGCAAGTCATTCCCAAGCTGTTCTTGATTGTTTGAGGAACCGGCATGAATGGGCAAGGCTGGTTGATCGCGGCCCAAAGACAAATACTACTAGGAAAAGGCGTAGTAAGCTGGATGCTGAAGAATCTGATGATAATGAATATGACAAGGGAAAAACTGCAAAAGACGGCGAAGGGAAGAACTTGGAATTGCAAAAAGAAGAGTTTCCTAAAGGTAAGCGCAAAGCTCGAAAACGCAGGCGGCTGGCTCTTCAGGGAAAAGCAGTAAAGGATGTCAGAAGGAAACAGAAAGCTGACTCACTTACTGGCGAAGACGTAGGCCCATTCTCCAATACTAGTGAAGAGAGCTTGTTTAGTGAGGATGGAATTCAAGTTGACAGAACATGTCCAGCAGGAAGTACATCGGATGAGGCGGGAAGTGCTTAA 3561 0.4299 MKGRSNRPQNMDPPPDEWVDGSWTVDCICGVTFDDGEEMVKCDECDVWVHTRCSRYVKGDDMFACDKCKAKNNRAGADNNTEETEVAQLLIDLPTKTISLERRNNNKSTSISSRVASCSRRPFKLWTDIPMEERVHVQGIPGGDPSLFAGKTVSSIFGPQLWKCTGYVPKKFNFQYREFPSWYENENDSDKGAQENDTDIKDKDNGAGVLLSFSKETNNMLPTSPVAALVDMKSSQGKKGFKENGTGKVGKDHMPRVHNAVKKERTSVSPFVVHSSKRRKDEFSKDRIGKKKRVKTSDKEERRTSDREDVDPRRKTSDREDVDPKRRTSDREDVDPKRRTSHSSKTAFTSTSDAKQLPFYGGRGPKVFKDDIRNIKNKNVKDSVARDHISNDSFAGGIIMEASINNNVTTTEESSEALYPNKTRQSHSAGDVLVEGKTGHKVLEMSSKTDDAVTSVLKHTYLENASAKKKGGDCLEANHVDDTLVRSHASPQTEDHCGSAPEHMGKQVSQDIDCNQNPSSGQCKVKVKREEDDDDKFKLSNFHSSPISGLKNNGKPSNPTSVIDKVNDAAVLSLPSCEGKVGNVGISSEVLLDNHTNKLNELPGDFCRGKEEVEGSEGSLETQKGFSKTKDGLGSAKNPSKSETLECPSKMLASVGKLSPTSSTMNSKSFSQDFKSEDTEIANPFTKHGAKSDRNNYIKSESCMNDASMDEIPRKSVRERPKSSLNHNSKGLHSSRSMQNSVSKQVNPDARDSVHCSSTKPSSGQQTPNVFGSSESNASIHHQKGPQVQNKISSSAPQKVEKLNQTNAHPSSKLNQNNTPSLNPSPTLNSSMLSDEELALLLHQELNSSPRVPRVPRARQTGSLPQLTSTSATNMLMKRASVGGKDNYLVCKRKYKDATRDGVCSSREPEDETKRIEKEKVQSSSDQRKHDMAYMEDASVKEEGSHACVTTANSITSNVVSTTPATENSNPLSPGEDCNLSSMRNSPRNISDDDTATPGRPVHHTLPGLINDIMSKGRRMTYEELCGAVLPHWPNLRKHNGERYAYASHSQAVLDCLRNRHEWARLVDRGPKTNTTRKRRSKLDAEESDDNEYDKGKTAKDGEGKNLELQKEEFPKGKRKARKRRRLALQGKAVKDVRRKQKADSLTGEDVGPFSNTSEESLFSEDGIQVDRTCPAGSTSDEAGSA* 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1221 1186 PANTHER UNCHARACTERIZED 1 1182 - -
Psa6g1221 1186 MobiDBLite consensus disorder prediction 1130 1146 - -
Psa6g1221 1186 MobiDBLite consensus disorder prediction 1073 1116 - -
Psa6g1221 1186 MobiDBLite consensus disorder prediction 274 342 - -
Psa6g1221 1186 SMART PHD_3 26 69 IPR001965 -
Psa6g1221 1186 ProSitePatterns Zinc finger PHD-type signature. 27 68 IPR019786 -
Psa6g1221 1186 MobiDBLite consensus disorder prediction 959 978 - -
Psa6g1221 1186 MobiDBLite consensus disorder prediction 681 801 - -
Psa6g1221 1186 MobiDBLite consensus disorder prediction 1150 1164 - -
Psa6g1221 1186 MobiDBLite consensus disorder prediction 1073 1186 - -
Psa6g1221 1186 MobiDBLite consensus disorder prediction 902 930 - -
Psa6g1221 1186 MobiDBLite consensus disorder prediction 849 869 - -
Psa6g1221 1186 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SET-26-RELATED 1 1182 - -
Psa6g1221 1186 MobiDBLite consensus disorder prediction 727 801 - -
Psa6g1221 1186 MobiDBLite consensus disorder prediction 244 263 - -
Psa6g1221 1186 MobiDBLite consensus disorder prediction 711 726 - -
Psa6g1221 1186 SUPERFAMILY FYVE/PHD zinc finger 16 72 IPR011011 -
Psa6g1221 1186 MobiDBLite consensus disorder prediction 232 359 - -
Psa6g1221 1186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 16 76 IPR013083 -
Psa6g1221 1186 MobiDBLite consensus disorder prediction 611 647 - -
Psa6g1221 1186 MobiDBLite consensus disorder prediction 620 647 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1221 25 68 PHD Transcription Factor Family AT5G22260 44.681 1.00e-06 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1221 - - gmx:100810855 1412.51