Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1206 ATGGACAAATCCCTCATGCCACAAGTCTTCACAGGCCATCATAATTGGTATGAATCCACTCTTGATTCCACAAAATCATCAAAAAGTTTAGTATACACTTACAATCATGCCATGCATGGATTCAGTGCAGTACTATCAGAAAAAGAGTTAAACAACCTCAAAAAATCTCATGGTTTTGTCACAGCTTACCCTGACAGAACAGCAACAATAGACACAACACACACCTTTGAGTTTCTTTCATTAGACCCTTCAAAAGGGTTATGGAATGCATCAAATTTAGGTGAAAATGTTATTGTTGGTCTTATTGACACTGGTATTTGGCCTGAAAGTGAAAGCTTTCAAGACAACGGCATGTCGAAAAACATCCCAACAAAATGGAAAGGAAAATGTGAAATAGGACAAGATTTCAACACTTCAATTTTGAAACTCGGAAACGGCGAAACCATTGTTGGTTGGACTTTGTTTCCTGCTACTAATGCTATAGTTGAGAATCTTCAACTTGTTTACAACAAAACTCTATCATCATGCAATTCAATTAGTCTCTTAAGTGAAGCTTCAACAAGAGGAATCATTGTTTGTGAAGCACTTGAATCAGTTTCAGTGATTACCCAAATCAATGCTATTACTTCAGCAAGTGTAGTTGGTGCTGTTTTCATCTCAGAAGATCCAATACTTCTAGAAACAGGAAGAGTTTTTTCTCCAAATAATACGCAAAATCCGATATCGGATAATGGCAATCCATCTCAATATGCTTCTCCTCTTGCTATGGGAGCCGGTGAAATCGATCCTAATAAAGCATTGGATCCTGGTTTAATATATGATGCTACACCACAAGATTATGTTAACCTCCTTTGTGATTTTGGTTACACGCATAATCAAATATTGACTATTACAAGATCAAAAAAGTATAACTGTGATAACCCTTCTTCTGATCTTAATTATCCTTCTTTTATAGCTTTGTATGGTAACAAAAGAAGAACAATGGTGCAGAAGTTTTTGAGGACTGTGACTAATGTTGGAGATGGTGCTGCTAGTTATAATGTTAGTGTGAGAAAACCAAAGGGTTGTGATGTTAATGTTTTGCCTGAGAAAATGGAATTTGGGTATAAGAATGAGAAAAAGAGTTATTCTGTTGTTGTGAAGTGTAAGAGGAAGAATAAGAAGGAAAAAAAGGTGACATTTGGTGATATTGTTTGGGTTGAAGAGGGTGGTTTTGGACGTAATGTTAGGAGTCCTATTGTTGTGGCACCAAGTGACTTTGTTTGA 1266 0.3633 MDKSLMPQVFTGHHNWYESTLDSTKSSKSLVYTYNHAMHGFSAVLSEKELNNLKKSHGFVTAYPDRTATIDTTHTFEFLSLDPSKGLWNASNLGENVIVGLIDTGIWPESESFQDNGMSKNIPTKWKGKCEIGQDFNTSILKLGNGETIVGWTLFPATNAIVENLQLVYNKTLSSCNSISLLSEASTRGIIVCEALESVSVITQINAITSASVVGAVFISEDPILLETGRVFSPNNTQNPISDNGNPSQYASPLAMGAGEIDPNKALDPGLIYDATPQDYVNLLCDFGYTHNQILTITRSKKYNCDNPSSDLNYPSFIALYGNKRRTMVQKFLRTVTNVGDGAASYNVSVRKPKGCDVNVLPEKMEFGYKNEKKSYSVVVKCKRKNKKEKKVTFGDIVWVEEGGFGRNVRSPIVVAPSDFV* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1206 421 CDD PA_subtilisin_like 141 228 - -
Psa6g1206 421 Pfam Fibronectin type-III domain 311 415 IPR041469 -
Psa6g1206 421 Gene3D - 284 417 - -
Psa6g1206 421 Pfam Peptidase inhibitor I9 5 68 IPR010259 -
Psa6g1206 421 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 141 242 IPR045051 -
Psa6g1206 421 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 138 IPR045051 -
Psa6g1206 421 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 251 416 IPR045051 -
Psa6g1206 421 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 70 IPR037045 -
Psa6g1206 421 SUPERFAMILY Subtilisin-like 13 305 IPR036852 GO:0004252|GO:0006508
Psa6g1206 421 PANTHER OS01G0868800 PROTEIN 141 242 - -
Psa6g1206 421 PANTHER OS01G0868800 PROTEIN 4 138 - -
Psa6g1206 421 PANTHER OS01G0868800 PROTEIN 251 416 - -
Psa6g1206 421 Gene3D Peptidase S8/S53 domain 96 138 IPR036852 GO:0004252|GO:0006508
Psa6g1206 421 Gene3D - 139 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1206 Psa-Chr6 48300691 48302957 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1206 236 415 Subtilisin-like Serine Gene Family AT3G14067 32.984 6.87e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1206 - - mtr:MTR_7g079295 344.739