Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1196 ATGAATCAACGGCACCATCACCCGCCGCTTAACTCCTCCAAAACTCCATCCTCTACGGCGGCGCCAGATTCACCTCCGCAACACATCACCAATCGTAAAGACACTGTAAGGGAGAGGAGTGAGGTGGAATCTCATGATCCAACTGCAGCTAGAAAAGTTCAGAAGGCTGATCGTGAGAAAATCAGGAGAGATCGGTTGAATGATCAGTTTCATGAATTGGGAAACGCCTTAGGTCAGTCAATTCATCTTTGTGTATCTTTGCTAATCCAAGAAAAGAATGAACTCCGAGAAGAGAAAGCGTCGTTAAAATCCGATATAGAAAATCTTAACTCACAGTATCAGCAGAGAGTTAGAGTCATGCCTCCGTGGACTGCAATGGACCATTCTGTTGTCATGAGTAGCCCTTATCCATATCCAGTTCCTATGCCAATCCCTCCTGCTCCAGTTTCCATTCACCCACATATGCAACATTTTCCCTACTTTGGAAACCCAAATCCTGGTCATATTCCGAGTCTATGCTCAATGTATATTCCATTTTCGGCTCCGCCTAACCCTCCAATAGAGATGCCATCAGCTCAGTATGCTTCTACATCACACGTGTTGTATCGAAAAGAACCGCGAAGCAAGTCACCGGGTCATAGAAGACCTAGTGATGCCAAAAGATGTAGTGTGTCTCCTGATGTGGCTACAGAACTTGAACTTAAGATGCCTGGTTCATCAACACAACAGGATTCAATGTCTGGAGGAAGGAAGGGCAAGCATTCGGTCATGAGTGATAGAATCATCATAGATGAAAGTGCTTCGAGCCGGTATTCTCCATCTCAAGGACCTCAAGATAGCTTCGACAGTGTCGGACACACCCCAAAGGCTGTTGATTGA 879 0.4562 MNQRHHHPPLNSSKTPSSTAAPDSPPQHITNRKDTVRERSEVESHDPTAARKVQKADREKIRRDRLNDQFHELGNALGQSIHLCVSLLIQEKNELREEKASLKSDIENLNSQYQQRVRVMPPWTAMDHSVVMSSPYPYPVPMPIPPAPVSIHPHMQHFPYFGNPNPGHIPSLCSMYIPFSAPPNPPIEMPSAQYASTSHVLYRKEPRSKSPGHRRPSDAKRCSVSPDVATELELKMPGSSTQQDSMSGGRKGKHSVMSDRIIIDESASSRYSPSQGPQDSFDSVGHTPKAVD* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1196 292 MobiDBLite consensus disorder prediction 265 282 - -
Psa6g1196 292 MobiDBLite consensus disorder prediction 203 221 - -
Psa6g1196 292 Coils Coil 85 112 - -
Psa6g1196 292 MobiDBLite consensus disorder prediction 30 60 - -
Psa6g1196 292 MobiDBLite consensus disorder prediction 1 60 - -
Psa6g1196 292 PANTHER TRANSCRIPTION FACTOR BHLH11 23 78 - -
Psa6g1196 292 PANTHER TRANSCRIPTION FACTOR BHLH11 88 290 - -
Psa6g1196 292 PANTHER TRANSCRIPTION FACTOR BHLH121 88 290 IPR044579 GO:0003700|GO:0055072
Psa6g1196 292 PANTHER TRANSCRIPTION FACTOR BHLH121 23 78 IPR044579 GO:0003700|GO:0055072
Psa6g1196 292 MobiDBLite consensus disorder prediction 203 292 - -
Psa6g1196 292 MobiDBLite consensus disorder prediction 235 249 - -
Psa6g1196 292 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1196 Psa-Chr6 47709340 47711069 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1196 48 254 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 42.798 9.41e-45 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1196 - - cam:101509613 321.627