Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1188 ATGGAGGGTGAAGAAATTGGAATTAGAAAAGATGTTGAAGAAAGTGATGTTGGAAAAGAAAAAGAAAATGATGAAGAGGCTTTAAAGAAGATTATTGCAAGCCATCCTTTATTTGAAGTGTTAATTGAATCTCACATTAATTGTTTGAAGGTAGGATCTGAGGATGCAGAGGAGTTTGATATAACACGTGATGAATGGAAGAAATTGGTGAACATAAAGTCCAAAGAAACTACTAGTCCAAACACTTCAGAGCTTGATCACTTCATGGAAGCATATTGCATGGCGCTGGGCAAGCTCAAGAAGTGA 306 0.366 MEGEEIGIRKDVEESDVGKEKENDEEALKKIIASHPLFEVLIESHINCLKVGSEDAEEFDITRDEWKKLVNIKSKETTSPNTSELDHFMEAYCMALGKLKK* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1188 101 MobiDBLite consensus disorder prediction 1 24 - -
Psa6g1188 101 SMART KNOX1_2 26 68 IPR005540 GO:0003677|GO:0005634
Psa6g1188 101 PANTHER FUSED COMPOUND LEAF 1 14 100 - -
Psa6g1188 101 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 14 100 - -
Psa6g1188 101 Pfam KNOX1 domain 27 52 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1188 Psa-Chr6 47184548 47186503 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1188 23 101 Homeobox Transcription Factor Family AT4G08150 28.736 3.62e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1188 - - mtr:MTR_1g032750 147.902