Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1184 ATGTTAACCTTTGTTAAACACTTCTCATCTGGTCATCCTGATTCATTCATCAAAAACATCGTTTCCAAGTATGGGCGAAACGGTATCTATAAGTCACACTTGTTTGGAAGTCCGAGCATAATCATATGTGAAGCTGATTTAATTATGAAAGTGCTAACAGATGATGAGACTTATAAGTTTAGTTATCCAAAATCAACGGTAGAATTGCTTAAATATAAACCCTATTGGAGTTTTTCTCGAAAAGAACAAATGCTTTTTAGACGCATAATCTCTTCTCTTACTCTGAACAACACTTCATTAGAAAATTACCTGTCGAATATTGAGGAAATCATGGTGAAATCGCTGGAGGATTTTTCTAGCATGAATCGTCCTGTTGAGTTGTTGAAAGAGATGAAGAATGTTTCGTTTAAAGTTATCGTTGGTCTTTTCATGGGTTCTTATGATGAACGATTCATGTCCAAAATAGGGAATTCTTTTAGTCATATGCACTCGGCTTTGTTTTGTATGCCATTTAATCTTCCGGGGTTTGCTTTCCGTAGAGGACTCATTGCACGTGAGAAGCTAGCCAAATTAGTAAAACCTATTGTGAAAGAAAGGAGGTTGATGATAAGAAAGGGTGACAAAAAAAATTTACTTGATATTCTTTTACAAGTAAATGATGAAGATGGTTGGAAACCAGATGATGATGATATCATCCAAATGTTGATTGCAATGGTACTTGCTGGTCACGAAACCACTGCACATGGACTCATGTGGTCAATTATATATCTTACACAAAATCCACATATCATGAAAAAGGCTAAGGAGGAGCAGGAGGAAATCATGAAGGCAAGAGAGGGCACAAAGAAAAAATTAAGTTTTGAAGAGATTAAGAAAATGGTTTATCTCTCTCAAGTCATTGATGAAACATTACGCCATATCAGTCTTACTTTTGCACTTTTTCGAGAGACAACTAGAGACGTTAACATTAACGGTTATATAATACCAAAAGGATGGAAAGTCCTTCCTTGGCTAAAATCTATTCACAAAGATCCTACCTATTATTCAAATCCAGACGAATTTAATCCATCAAGATGGAATGATCAGGATACCAAGCATGGAACCTTCATTCCTTTTGGAGTAGGAAGTAGGCACTGCCCTGGGAATAGCTTGGCCAAAATTGAAATTTATGTATTTCTACATTATTTCATTCTCAATTACAAGTTGGAACGTGTAAATCCAGATTGTCCTATTACTTGCTTGCCAGCACCTATGCCCACAGATAATTGTCTTGCTAAGGTGATAAAGGTATCAAGTTCATAG 1302 0.3602 MLTFVKHFSSGHPDSFIKNIVSKYGRNGIYKSHLFGSPSIIICEADLIMKVLTDDETYKFSYPKSTVELLKYKPYWSFSRKEQMLFRRIISSLTLNNTSLENYLSNIEEIMVKSLEDFSSMNRPVELLKEMKNVSFKVIVGLFMGSYDERFMSKIGNSFSHMHSALFCMPFNLPGFAFRRGLIAREKLAKLVKPIVKERRLMIRKGDKKNLLDILLQVNDEDGWKPDDDDIIQMLIAMVLAGHETTAHGLMWSIIYLTQNPHIMKKAKEEQEEIMKAREGTKKKLSFEEIKKMVYLSQVIDETLRHISLTFALFRETTRDVNINGYIIPKGWKVLPWLKSIHKDPTYYSNPDEFNPSRWNDQDTKHGTFIPFGVGSRHCPGNSLAKIEIYVFLHYFILNYKLERVNPDCPITCLPAPMPTDNCLAKVIKVSSS* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1184 433 Gene3D Cytochrome P450 1 430 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1184 433 Coils Coil 264 284 - -
Psa6g1184 433 PANTHER CYTOCHROME P450 26 1 408 - -
Psa6g1184 433 Pfam Cytochrome P450 10 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1184 433 PRINTS E-class P450 group I signature 106 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1184 433 PRINTS E-class P450 group I signature 337 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1184 433 PRINTS E-class P450 group I signature 369 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1184 433 PRINTS E-class P450 group I signature 379 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1184 433 PRINTS P450 superfamily signature 241 258 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1184 433 PRINTS P450 superfamily signature 298 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1184 433 PRINTS P450 superfamily signature 370 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1184 433 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1184 433 SUPERFAMILY Cytochrome P450 8 415 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1184 433 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 372 381 IPR017972 GO:0005506|GO:0016705
Psa6g1184 433 PANTHER CYTOCHROME P450 88D6 1 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1184 Psa-Chr6 47035020 47042018 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1184 1 427 Cytochrome P450 AT1G05160 41.763 4.90e-133 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1184 K04123 K17875 ag:BAG68929 546.584