Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1183 ATGGATATAGAATATTGGATTTGGATTTATGCCCTTTTGTTAGCAACCTATTTCTGTGTGATCAATTTTGTGTGGAGGTTGAATGAATGTTACTATAACATAAAATTAAGAAAGAAACAATACCCTCTTCCTCCTGGTGATTTGGGATGGCCTTTTGTAGGAAATATGTTGGCCTTTATTAAACATTTCAAATCTGATCATCCTGATTTATTCATCAACGACCTTGTTTCCAAGTATGGACGAATCGGTATCTACAAGATGCATTTATTTGGAAGTCCAAGCATCATTATTTGTGACGCTGAGATGTGTAGACGAGTGTTGACAGACGATGAGACCTTTAAAATCGGTTATCCAAAATCCACCATTGAAGTTGTGAGATGTAAATGTATTTGGAGTTTGTCTCGAGAAGAACACAAGCGTTTTAGACGATTAATCTCTTCTCTTACCATCGGCCATAATACATTAGAAACATACCTATCATGCATGGAGGATATTGTGGTTAATTCTCTAGACGAAATTTCTAGTATGAATGAGCCGGTTGAGTTTTTGAAAGAACTGAAAAATATTTCCTTTAAAATCATCATTGATATCTTTATGGGCTCTTACAATCAACATATTATCACCAAAATAGGAAATTCTTTTACTGAAATGCATAGGGCTTTGTTCTCTTTGCCGGTAAATCTTCCCGGATTTACTTTTCGTAAAGGAATCATGGCACGCGAGAAGCTGGCGAAATTAGTTAAACCTATTGTGGAAGAAAGGAGGAGGATGATAAAACATGGTGAAAGGAAAGATCTCCTTGATATGTTTTTGGAAGCAAAGGATGAAGATGGTTGGAAACCAGAAGATGAAGATATTATTGACATATTGATAGGGATTGTACTTGCTGGCCATGACAGTACAGCTAGTAGTATGATGTGGTCAATGATGTATCTTACACAAAATCCACATATTTTGGAAAAGGCCAAGGAGGAGCAGGAGGAGATCATGAAGAACAGACTGCCCATGCAGAAACATTTAAATTTAAAGGATATTAAGAAAATGACTTATCTTTCTCATATAATCAATGAATCAATGAGACTTAAGAATTCCAATTTTGCAATTTTTCGAGAAGCAACTATAGACGTTAACATCAATGGTTACATTATACCGAAAGGATGGAAAGTGTTAACTTGGGCAACAGCTATTCATATGGATCCTACTTATTATCCAAATCCATATGAATTTAATCCATCTAGATGGAATGATCACAATATTAAAATTGGAACCTTTCATCATTTTGGTGCTGGAAGTAGATACTGTCCTGGAAGTGATTTGGCTAAACTTGAAATTTCCATATTTCTACATTATTTTCTTCTCAATTATAAGCTTGAGATAGTGAATCCAAAATGTCCCATTACTAATTTATCATCACCCAAACCCATTGACAATTGTCTTGCTAAGGTGATAAAGGTCTCAAGCATTGCATAG 1470 0.351 MDIEYWIWIYALLLATYFCVINFVWRLNECYYNIKLRKKQYPLPPGDLGWPFVGNMLAFIKHFKSDHPDLFINDLVSKYGRIGIYKMHLFGSPSIIICDAEMCRRVLTDDETFKIGYPKSTIEVVRCKCIWSLSREEHKRFRRLISSLTIGHNTLETYLSCMEDIVVNSLDEISSMNEPVEFLKELKNISFKIIIDIFMGSYNQHIITKIGNSFTEMHRALFSLPVNLPGFTFRKGIMAREKLAKLVKPIVEERRRMIKHGERKDLLDMFLEAKDEDGWKPEDEDIIDILIGIVLAGHDSTASSMMWSMMYLTQNPHILEKAKEEQEEIMKNRLPMQKHLNLKDIKKMTYLSHIINESMRLKNSNFAIFREATIDVNINGYIIPKGWKVLTWATAIHMDPTYYPNPYEFNPSRWNDHNIKIGTFHHFGAGSRYCPGSDLAKLEISIFLHYFLLNYKLEIVNPKCPITNLSSPKPIDNCLAKVIKVSSIA* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1183 489 Pfam Cytochrome P450 44 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1183 489 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1183 489 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1183 489 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1183 489 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1183 489 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1183 489 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1183 489 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1183 489 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1183 489 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1183 489 Gene3D Cytochrome P450 33 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1183 489 PANTHER CYTOCHROME P450 88D6 22 463 - -
Psa6g1183 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Psa6g1183 489 PANTHER CYTOCHROME P450 26 22 463 - -
Psa6g1183 489 SUPERFAMILY Cytochrome P450 37 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1183 Psa-Chr6 46974514 47008989 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1183 7 482 Cytochrome P450 AT1G05160 44.167 8.71e-156 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1183 K04123 K17875 ag:BAG68929 633.639