Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1180 ATGGATATACTAGTACACTATTCGCTGTGGTTATCTGCCATTTCACTAGCAAGTTATTTTTGTGTAAACAATTTAGTGTGGAAATTGAATGATTGGTACTATAATCTCAAACAAAGAAACAAACAGCACCCTCTACCTCTTGGTGATTTGGGATGGCCATTTATCGGCGATATGTTAACCTTTGTTAAACACTTCTCATCTGGTCATCCTGATTCATTCATCAACAACATTGTTTCCAAGTATGGACGAAACGATATCTACAAGACTCATTTATTTGGAAACCCAAGCATTATAGTTTGTGAGGCCGAAATGTGTAGATGGGTGTTGACAGATGATGAGACATTTAAAATCGGTTATCCAAAATCCCTTACAGAAGTAGTGAGATGTAAACCTATTTGGAGTCTCTCTAAAGAACAACACAAACGTTTTAGACGTTTTATCTCGTCACGTACCATGGGACATAATACAATAGAAACGTATTTAACACGCATCGAGAGCACTGTGATTAATTCTTTGGAGGAACTTTCTAACATGAGTCACCCGGTTGAGTTTTTGAGAGAGATGAAAAATATTTCCTTTAATATCATCATTGATATTTTCTTAGGCTCTTACAATCAACATATCATAAATAAAATCGGAAATTCTTTTACCGAAATGCATGGTGCTTTGTTCTCTATGCCCGTTAATCTTCCCGGTTTTGCTTTTCGTAAAGGACTCATGGCACGCGAGAAGCTGGCGAAATTAGTTAAACCTATTGTGGAAGAAAGGAGATTGATGATAAAAAATGGTGAAAGAAAAGATCTACTTGATGTTCTTTTGGAAGCAAAGGATGAAGATGGTTGGAAACCAGAAGATGAGGATATTATTGACATGTTGATAGGGATTGTACTTGCTGGCCATGAAGCTACAGCTAGTAGTATGATGTGGTCAATGATGTATCTTACACAAAATCCACATACTCTTGAAAAGGCCAAGAAGGAGCAAGAGGAAATCGTGAAGACCAGACTACCAACAGAAAAATATTTAAGTCTTAAAGATATAAAGAAAATGAATTATCTTTCTCAAGTAATCAATGAAACGATGCGCCTTATGAGTATAAACTTTGCTATTTTTCGAGAGGCAACAATTGACGTTAACATCAATGGTTATACCATACCGAAAGGATGGAAAGTGTTAACTTGGATGAGAGCTATACATATGAATCCTACATGTTATCCAAATCCAGAAGAATTCAATCCATCTAGATGGGATGATCATAATATTAAAATTGGAAGCTTCCTTCCTTTTGGAGCTGGAAGTAGATTCTGTCCTGGAAGTGATTTGGCTAAAATTGAAATTTCTATATTCCTACATCATTTCCTTCTTAATTATAAGCTTGAGCTAGTGAATCCAAAATGTCCTATTACTAGGTTACCATCACCCAAACCCACAGATAATTGCCTTGCTAAGGTGATAAAGGTTTCAAATATTGCATAG 1476 0.3591 MDILVHYSLWLSAISLASYFCVNNLVWKLNDWYYNLKQRNKQHPLPLGDLGWPFIGDMLTFVKHFSSGHPDSFINNIVSKYGRNDIYKTHLFGNPSIIVCEAEMCRWVLTDDETFKIGYPKSLTEVVRCKPIWSLSKEQHKRFRRFISSRTMGHNTIETYLTRIESTVINSLEELSNMSHPVEFLREMKNISFNIIIDIFLGSYNQHIINKIGNSFTEMHGALFSMPVNLPGFAFRKGLMAREKLAKLVKPIVEERRLMIKNGERKDLLDVLLEAKDEDGWKPEDEDIIDMLIGIVLAGHEATASSMMWSMMYLTQNPHTLEKAKKEQEEIVKTRLPTEKYLSLKDIKKMNYLSQVINETMRLMSINFAIFREATIDVNINGYTIPKGWKVLTWMRAIHMNPTCYPNPEEFNPSRWDDHNIKIGSFLPFGAGSRFCPGSDLAKIEISIFLHHFLLNYKLELVNPKCPITRLPSPKPTDNCLAKVIKVSNIA* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1180 491 Pfam Cytochrome P450 47 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1180 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Psa6g1180 491 Gene3D Cytochrome P450 35 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1180 491 PANTHER CYTOCHROME P450 26 25 465 - -
Psa6g1180 491 SUPERFAMILY Cytochrome P450 42 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1180 491 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1180 491 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1180 491 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1180 491 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1180 491 PANTHER CYTOCHROME P450 88D6 25 465 - -
Psa6g1180 491 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1180 491 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1180 491 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1180 491 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g1180 491 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1180 Psa-Chr6 46830676 46845957 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1180 9 484 Cytochrome P450 AT1G05160 46.250 4.93e-163 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1180 K04123 K17875 ag:BAG68929 669.077