Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1170 ATGCCTCGTGGGTTCCAAATTAGAGCGACTTCAGTTACCATATTTGCCCATTTGTTATTCATAGCAATAACAACCCTTGTGTTAGTTTGGTTGTTTCACTTCCGTGAAGGCGTTGCTTTCAATTCTTCCAACAAACTCAAGATTTTTAATCTCCATCCACTTTTAATGGTTATAGGGTTTATCTTAGTAGGTGGTGAAGCTATCATAACATACAAATTCATCCCTGGGAAAAGAAGCTCAGGAAAAGTGGTTCACCTATTGCTCCATCTGATAGCTCTATTATCAGGAGTTTTAGGAATTATTGCAGTTTTCAAATCTAAAAAAGAGGCAGGTCTTCCTGATATGTATAGTTTGCACTCTTGGCTAGGCATCTCAGCAATCTCCGCGTTTGGTTTTCAGTATATATTGGCATTCTTTGCTTACTTCTTCCCAGGAGCAGACGCTTCAACAAGAGCTACACTTTTGCCATGGCACAAGTTTCTAGGAATTGTGATATTCCTCCTTGCAGTTGGCACTGCTGAAACGGGTTTGGTTGAATATTTTAAATTTCTAGAATTGTTCAGAAACCAAGAGGCACTAATAGTAAATTTCACTGGTCTTTTGCTCTTTCTGTTTGCTGTCTTTGTTAGTCTCTCTGTGATTCTACCAAGAAATTACTGA 660 0.3864 MPRGFQIRATSVTIFAHLLFIAITTLVLVWLFHFREGVAFNSSNKLKIFNLHPLLMVIGFILVGGEAIITYKFIPGKRSSGKVVHLLLHLIALLSGVLGIIAVFKSKKEAGLPDMYSLHSWLGISAISAFGFQYILAFFAYFFPGADASTRATLLPWHKFLGIVIFLLAVGTAETGLVEYFKFLELFRNQEALIVNFTGLLLFLFAVFVSLSVILPRNY* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1170 219 Gene3D - 5 219 - -
Psa6g1170 219 ProSiteProfiles Cytochrome b561 domain profile. 15 214 IPR006593 -
Psa6g1170 219 PANTHER CYTOCHROME B561-RELATED 6 216 IPR043205 GO:0016491
Psa6g1170 219 SMART 561_7 51 177 IPR006593 -
Psa6g1170 219 Pfam Eukaryotic cytochrome b561 51 179 IPR006593 -
Psa6g1170 219 PANTHER CYTOCHROME B561 FAMILY PROTEIN, EXPRESSED 6 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1170 Psa-Chr6 46039023 46040285 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1170 6 212 Chloroplast and Mitochondria Gene Families AT4G25570 46.919 6.53e-64 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1170 K08360 - gmx:100785824 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1170 6 46039023 46040285 Psa6g1170 6 46039023 46040285 ECH