Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1165 ATGCAGCAAAACAACAATAAGAACAACAAAAACCCATCAATCTCACTACACAACACTCACGTTAAGCTACTAGCCTTCGACCTCCTAACCCTAACCCCACCATCCTCCCCAGACCAACCCTTCACCCGCAAATCAATCCCCATCACACGCCTCGAAGCCCTAGGAACCATCACCCTCCGCGATCAGAAACCCTCTAAATTCCTTTGTTTCGCTGTGGACGATGGAACCGGTTGTATCCCCTGTATCCTCTGGCTTAACCATTTGACTTCCCCTCACATGGCTCGCCGTCGGAGTCCGCAGGATCTTTGCCTTCTGGCCGACGCCGACGCGAGATCTGCGGAAGTAGTGAAGGTTGGGGCTGTTGCTAGGGTTAGGGGGAGAGTTATGGCGTTTAAGGGGAGTGTTCAGATTACTGTGACAGATGTTGTTGGTGAAAGGGATCCTAATGTGGAGATTTTGCATTGGGTTGATTGTGTTAAGTCGGCTCGTAACTGTTATAATCTTATTACTTTTTCTTCTTCTTCTTAA 528 0.4867 MQQNNNKNNKNPSISLHNTHVKLLAFDLLTLTPPSSPDQPFTRKSIPITRLEALGTITLRDQKPSKFLCFAVDDGTGCIPCILWLNHLTSPHMARRRSPQDLCLLADADARSAEVVKVGAVARVRGRVMAFKGSVQITVTDVVGERDPNVEILHWVDCVKSARNCYNLITFSSSS* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1165 175 Pfam OB-fold nucleic acid binding domain 55 142 IPR004365 GO:0003676
Psa6g1165 175 PANTHER REPLICATION PROTEIN A-RELATED 15 168 IPR040260 -
Psa6g1165 175 Gene3D - 15 169 IPR012340 -
Psa6g1165 175 SUPERFAMILY Nucleic acid-binding proteins 37 160 IPR012340 -
Psa6g1165 175 PANTHER CST COMPLEX SUBUNIT STN1 15 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1165 Psa-Chr6 45679204 45679731 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1165 45 159 Core DNA Replication Machinery Family AT2G24490 26.087 1.57e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1165 K23312 - csin:114287844 200.675