Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1135 ATGTTCATATTCTTATTTCTCTTTACCTTGCAAATCAAAACTCTAACAGCTACAAGAAGCACTGTGAATAATCCAACTACATTCTCCTTTATTTCTTTTAGTCCTGAAAGCTGCAACAATGGTGAATTGCTTTGTATGGGTTCAGCCACTTCAGGAAATGGTTGTATAAGTCTCACACCGGAGCCAGAGACACAACAAAGCAACAGTTCAGGTTCTATGTTTGGGACATCTGACATAGCTAACAAAGTGGGAAGGGTTTTGTACCCTCATCCAGTTCATGTTTGGCCGGCAATTATCACTACTACTTTCACTCTTAGGGTCACGCCGTTCTTGAAAAACTCGACCACCTCGGGTGATGGAATTGCATTAGTATTTGCACAAGATAACAGGCCTTCTTCAAATGATAGCTATGGTTCTTATCTTGGCATGTTTGATAGGTCTACACAAGATGAGGGTTTTCGACAGATAGGTGTGGAGTTAGACACATTCATGAATGAATTTGATCCAGATGGAAATCACATCGGCATAGTCACGACAAGCATCACAAATCCAATTGCTTTTAGTAGTATCAATAGCACTAATGTTGATCTTAAAAGTGGACGAGACGTTATCGTTAAAGTTGATTATAATGGCTGGAGTAAAACGATTTCGGTCTCGATCGGATACTCAAATAGCCAATTAAAGAGTGTTCTCAACCATTCGGTTAATTTACCTGATATAATTCCAAGTTCAGTTTATGTTGGTTTTACAGCCTCAACCGGCAAGACTTTTCCCGAAACTCATCAAATCCTAAATTGGTTTTTCACATCCGTGCCATTGCCCGTTCTTTCTGTTAAACACAGTGCTATTGGAAAAATCAAGTTCGCGTTGATAATTGTTTTACCGGTTCTTGTGTTAGTTAGTTTACTTTCTGTTATTTGGGAAGCTTGGAAGAAAAGGTATCAGAAGGGTGACCGGAATGAGGACATTGAAAGCCTATCGAGGACGGCTGCAGACGCGCCTAAGATGTTCGGTTACAAGGAACTGTCAAAAGCTACTTGTAAGTTCAGCAAAGAAAATCTTGTGGGAAGAGGTGGATTTGGAAGTGTTTATAAAGGGTTCATGGTGGAAAATGGAAAAACCATAGCAGTAAAGAAAATTTCAGCAACCTCTAAGCAAGGTGAAAGAGAGTTCTTAGCTGAAATATGTACCATTGGTCGTCTTCGACACAAAAACTTAGTCCAACTCCAAGGCTGGTGCAATGAAGGCAAAAACCTTCTCTTAGTTTACGATTACATGCAAAACGGAAGCCTTGATCACTTCATAGGCAAGGACATTCTAGACTGGCAAACAAGGCACAAGATATTAACCGGATTAGCATCAGCATTACTTTACCTTCATGAAGAATGCGGAAATCCAGTAGTTCACAGAGATGTTAAACCTAATAACGTAATGCTTGATTCTACTTACAATGCTCATTTAGGCGATTTCGGACTCGCAAGGTTACTGAAAAACGAAGACTCAGTAACTACAAATTTAGCTGGAACACCAGGCTATTTAGCACCCGAAATAGGCTTCACAGGAAAAGCTACACCTGAATCAGATGTTTATAGTTTTGGTATGGTTATACTTGAAGTCATTTGCGGGAAAAGGTCGAAAAGGGTAATGGAAGATAATAGTTTGGTGGATTATGTGTGGAATTTACATGCTCGAAATCAAATTCTCGAATGCGTTGATCAACAACTGAAAGATTGTTTTGATGTGGAAGAAGCTAAAAGAGGTTTGATGGTTGGACTGGCGTGTTTGCATCCGGATTCATTGTTTAGGCCAAAGATGAGGAAAGTTGTGCATATTTTTTTGAATCGAAATGAACCTTTGATGGAATTACCCGAACTGAGACCTACTGGAGTTTATGTATCGGTTTCTTGTACATCAATCACAGATTTTGTGTCAAGAACTGATCAGTTAGAGCTTCAATCATTGACTACATCTATGGACAATGTTCCCACTTGTATGAAGTATGATCAATAG 2010 0.3935 MFIFLFLFTLQIKTLTATRSTVNNPTTFSFISFSPESCNNGELLCMGSATSGNGCISLTPEPETQQSNSSGSMFGTSDIANKVGRVLYPHPVHVWPAIITTTFTLRVTPFLKNSTTSGDGIALVFAQDNRPSSNDSYGSYLGMFDRSTQDEGFRQIGVELDTFMNEFDPDGNHIGIVTTSITNPIAFSSINSTNVDLKSGRDVIVKVDYNGWSKTISVSIGYSNSQLKSVLNHSVNLPDIIPSSVYVGFTASTGKTFPETHQILNWFFTSVPLPVLSVKHSAIGKIKFALIIVLPVLVLVSLLSVIWEAWKKRYQKGDRNEDIESLSRTAADAPKMFGYKELSKATCKFSKENLVGRGGFGSVYKGFMVENGKTIAVKKISATSKQGEREFLAEICTIGRLRHKNLVQLQGWCNEGKNLLLVYDYMQNGSLDHFIGKDILDWQTRHKILTGLASALLYLHEECGNPVVHRDVKPNNVMLDSTYNAHLGDFGLARLLKNEDSVTTNLAGTPGYLAPEIGFTGKATPESDVYSFGMVILEVICGKRSKRVMEDNSLVDYVWNLHARNQILECVDQQLKDCFDVEEAKRGLMVGLACLHPDSLFRPKMRKVVHIFLNRNEPLMELPELRPTGVYVSVSCTSITDFVSRTDQLELQSLTTSMDNVPTCMKYDQ* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1135 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Psa6g1135 669 ProSitePatterns Protein kinases ATP-binding region signature. 355 379 IPR017441 GO:0005524
Psa6g1135 669 Pfam Legume lectin domain 27 271 IPR001220 GO:0030246
Psa6g1135 669 CDD lectin_legume_LecRK_Arcelin_ConA 26 270 IPR001220 GO:0030246
Psa6g1135 669 SUPERFAMILY Protein kinase-like (PK-like) 334 642 IPR011009 -
Psa6g1135 669 Gene3D Transferase(Phosphotransferase) domain 1 426 620 - -
Psa6g1135 669 Pfam Protein kinase domain 350 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g1135 669 CDD STKc_IRAK 355 612 - -
Psa6g1135 669 SMART serkin_6 349 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g1135 669 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 271 IPR013320 -
Psa6g1135 669 PANTHER - 53 641 - -
Psa6g1135 669 ProSitePatterns Legume lectins beta-chain signature. 156 162 IPR019825 -
Psa6g1135 669 ProSiteProfiles Protein kinase domain profile. 349 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g1135 669 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 53 641 - -
Psa6g1135 669 Gene3D - 24 279 - -
Psa6g1135 669 Gene3D Phosphorylase Kinase; domain 1 309 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1135 Psa-Chr6 44355454 44357982 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1135 28 648 Receptor kinase-like Gene Family AT5G55830 38.018 2.09e-121 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Psa6g1135 Pkinase 5.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1135 - - ccaj:109810929 931.013