Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1132 ATGCGGATAACTACCTCAGAGCCCAAGGATGTGGCTTTTGTTGTTGATGGATGGGCTCTTGAGATAGCACTTAAACACTACCGCAAAGCTTTCACTGAGCTGGCAGTGTTGTCAAGGACTGCTATATGCTGTCGTGTGACACCGTCGCAAAAAGCACAGCTTGTACAGATATTAAAATCATGTGATTATAGAACATTGGCAATTGGCGATGGAGGAAATGATGTAAGGATGATACAACAAGCAGATATTGGTGTGGGCATAAGTGGCAGAGAAGGATTGCAGGCAGCAAGAGCAGCTGATTACAGCATTGGAAAGTTTAGATTCCTAAAGAGATTAATTTTGGTCCATGGCCGGTATTCATACAACCGTACAGCATTTCTCTCCCAGTATTCATTCTATAAGTCCTTATTGATATGCTTCATCCAAATCTTTTTTTCATTTATTTCAGGCGTCTCTGGAACCAGCCTCTTCAATTCTGTTAGCTTGATGGCTTATAATGTTTTCTACACTAGTGTTCCTGTTCTGGTCAGTGTGCTTGACAAAGATCTTAGTGAGGAAACTGTGCTCCACCATCCTCAAATTTTATTCTACTGCCAAGCAGGAAGGCTTCTAAATCCTAGTACATTTGCTGGATGGTTTGGGCGATCCCTCTTCCATGCAGTAGTTGTATTTATAATAAGCATACATTCATATGCCTACGATAAGAGTGAAATGGAGGAGGTTTCAATGGTTGCACTTTCTGGTTGTATATGGTTGCAGGCTTTTGTAATAACAATGGAGACCAATTCATTTACAATATTGCAATATCTTGCTATATGGGGCAACTTGGCTGCCTTTTATGTCATCAACTGGATCTTTAGTGCTCTTCCTTCGTCAGGGATGTATACAATTATGTTCCGGTTGTGTCGACAACCATCATATTGGATAACAATATTTCTCATGACCGCTGCTGGGATGGGTCCAATTCTAGCCATCAAGTACTTTAGATATACATATAAATCGAGCAAAATCAATATACTTCAGCAGGCCGAACGCGTAGGGGGACCAATTTTGTCTCTTGCCACCATTGAGCCTCAGCTCAGATCTATGGAGAAAGATGTTTCTACATTGTCAATAGCACAACCCAAAAACAGAAATCCTGTATTTGAACCTCTGCTATCAGATTCTCCAAATTCCACGAGAAGATCTTTCGGACCAGGAGCACCATTTGATTTTTTTCAACCACAGTCTAGATTATCACTTTCTAACTACACAAGAAATAGCAAGGATAAATAA 1275 0.4055 MRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAVLSRTAICCRVTPSQKAQLVQILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFNSVSLMAYNVFYTSVPVLVSVLDKDLSEETVLHHPQILFYCQAGRLLNPSTFAGWFGRSLFHAVVVFIISIHSYAYDKSEMEEVSMVALSGCIWLQAFVITMETNSFTILQYLAIWGNLAAFYVINWIFSALPSSGMYTIMFRLCRQPSYWITIFLMTAAGMGPILAIKYFRYTYKSSKINILQQAERVGGPILSLATIEPQLRSMEKDVSTLSIAQPKNRNPVFEPLLSDSPNSTRRSFGPGAPFDFFQPQSRLSLSNYTRNSKDK* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1132 424 Pfam Phospholipid-translocating P-type ATPase C-terminal 96 333 IPR032630 -
Psa6g1132 424 SUPERFAMILY HAD-like 19 123 IPR036412 -
Psa6g1132 424 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 422 - -
Psa6g1132 424 SUPERFAMILY Calcium ATPase, transmembrane domain M 117 333 IPR023298 -
Psa6g1132 424 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 35 152 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa6g1132 424 Gene3D - 2 108 IPR023214 -
Psa6g1132 424 Pfam haloacid dehalogenase-like hydrolase 53 87 - -
Psa6g1132 424 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1132 Psa-Chr6 44258763 44262495 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1132 1 424 Primary Pumps ATPases AT5G44240 83.529 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1132 K01530 - gmx:100778546 777.319