Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1131 ATGAAGCGTTATGTTTACATCGATGATGATGAGTCATCTCACGATCTTTACTGTGATAATCGAATATCAAATAGAAAATATACTTTATTGAACTTTCTTCCAAAAAATTTATGGGAACAGTTCAGCCGATTCATGAATCAGTACTTTTTGCTGATAGCTTGTCTGCAGTTATGGCCTCTCATTACTCCAGTAAATCCTGCCAGTACATGGGGTCCACTTATCTTTATTTTTGCAGTCTCCGCATCAAAAGAGGCATGGGATGATTACAATAGATATCTTTCAGACAAAAAGGCAAATCAGAAGGAAGTATGGGTTGTTAGGAAAGGTGTCAAGAAACTTATTCAAGCCCAGGATATTCATGTAGGTAATATAATATGGCTACGTGAAAATGATGAAGTGCCTTGTGACCTTGTTTTAATTGGCACATCTGATCCCCAAGGAGTTTGCTATATAGAGACTTCTGCACTGGATGGTGAAACTGATTTAAAGACGCGGGTCATACCTTCTGCTTGCATGGGAATTGATGTTGAACTATTACACAAAATTAAGGGTGTAATTGAGTGTCCCAGTCCAGATAAAGACGTCAGAAGATTTGATGCAAACATGCGTTTGTACCCCCCTTTTATTGATAATGATGTATGCCCTTTAACCATTAAAAACACAATTCTTCAGTCATGTTACTTGAGAAATACTGAGTGGGCATGTGGAGTTGCTATCTATACAGGAAATGAAACCAAATTGGGCATGAGTAGGGGTATCCCAGAACCAAAGCTCACTGCTATGGATGCCATGATCGACAAGCTGACTGGTGCTATATTTATATTCCAAATTGTCGTTGTATTGGTTCTTGGCATAGCAGGTAATGTTTGGAAGGACACAGAAGCAAGGAAACAATGGTATGTTCTTTACCCTCATGAAGGCCCTTGGTATGAGTTATTGGTAATCCCTTTGCGGTTCGAGCTTCTTTGTTCTATCATGATACCCATTTCAATTAAGGTATCTCTGGATTTAATGAAGAGCATGTATGCAAAGTTTATTGACTGGGACCATCAAATGATTGACCTAGAGACTAGCATTCCATCTCATGCAACAAATACAGCGATAAGCGAGGACCTTGGACAAGTAGAGTACATTTTGACAGACAAAACAGGCACCCTGACTGAAAATAAGATGATATTTAGAAGATGTTGTATTAGTGGCATTTTCTATGGAAACGAGAGTGGAGATGCATTGAGAGATGTAGAGCTTCTTAATGCTGTTTCCAGTGGTTCTTCTGATGCCGTACTATTTGTTACAATTATGGCGATATGTAATACTGTCACACCTACACGAAGCAAAACTGGAGATATCTTGTATAAGGCACAATCTCAGGATGAAGATGCTCTTGTTCAAGCTGCTGCTCAGCTGCATATGATTTTCTTCAATAAAAGTGGAAACATTCTTGAAGTCAAGTTCAACACTACTATACTTCAGTATGAAGTCCTGGAGATCTTAGAGTTCACTTCTGATAGGAAAAGAATGTCAGTAGTGTTGAAAGATTGCCAAAATGGAAAGATCCTTCTCCTGTCAAAAGGAGCAGATGAGGCTATTCTTCCATATGCTCGTGCTGGGCAGCAAACCCGTCACTTCATTGAAGCTGTGGAACAATATGCTCACTTGGGATTACGTACACTATGTTTAGCTTGGCGTGAGTTAAAGAAAGATGAATATCAAGATTGGTCCTTGATGTTTAAAGAAGCCAGTAGCACGTTGGTTGATAGGGAGTGGAGAGTAGCTGAGGTCTGCCAAAGAGTAGAACATGACTTGGAAATTCTTGGTGTTACGGCGATAGAAGATCGCTTACAGGAAGGAGTTCCTGAAACAATAGAAACACTAAGGAAAGCTGGAATAAATTTTTGGATGCTAACAGGAGACAAACAGAATACTGCAATACAAATTGCCCTGTCATGTAATTTCATTTCCCCAGGTAGTGCACATTAG 1980 0.3944 MKRYVYIDDDESSHDLYCDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFLLIACLQLWPLITPVNPASTWGPLIFIFAVSASKEAWDDYNRYLSDKKANQKEVWVVRKGVKKLIQAQDIHVGNIIWLRENDEVPCDLVLIGTSDPQGVCYIETSALDGETDLKTRVIPSACMGIDVELLHKIKGVIECPSPDKDVRRFDANMRLYPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAIYTGNETKLGMSRGIPEPKLTAMDAMIDKLTGAIFIFQIVVVLVLGIAGNVWKDTEARKQWYVLYPHEGPWYELLVIPLRFELLCSIMIPISIKVSLDLMKSMYAKFIDWDHQMIDLETSIPSHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCISGIFYGNESGDALRDVELLNAVSSGSSDAVLFVTIMAICNTVTPTRSKTGDILYKAQSQDEDALVQAAAQLHMIFFNKSGNILEVKFNTTILQYEVLEILEFTSDRKRMSVVLKDCQNGKILLLSKGADEAILPYARAGQQTRHFIEAVEQYAHLGLRTLCLAWRELKKDEYQDWSLMFKEASSTLVDREWRVAEVCQRVEHDLEILGVTAIEDRLQEGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPGSAH* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1131 659 Gene3D - 608 658 IPR023214 -
Psa6g1131 659 SUPERFAMILY HAD-like 368 654 IPR036412 -
Psa6g1131 659 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 20 657 - -
Psa6g1131 659 Pfam Cation transport ATPase (P-type) 436 532 - -
Psa6g1131 659 PRINTS P-type cation-transporting ATPase superfamily signature 152 166 - -
Psa6g1131 659 PRINTS P-type cation-transporting ATPase superfamily signature 379 393 - -
Psa6g1131 659 PRINTS P-type cation-transporting ATPase superfamily signature 628 638 - -
Psa6g1131 659 Gene3D - 375 607 IPR023299 GO:0000166
Psa6g1131 659 SUPERFAMILY Calcium ATPase, transduction domain A 100 248 IPR008250 -
Psa6g1131 659 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 350 IPR023298 -
Psa6g1131 659 Pfam E1-E2 ATPase 99 292 - -
Psa6g1131 659 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 20 657 - -
Psa6g1131 659 Gene3D - 74 251 - -
Psa6g1131 659 Pfam Phospholipid-translocating ATPase N-terminal 5 70 IPR032631 -
Psa6g1131 659 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 386 573 IPR023299 GO:0000166
Psa6g1131 659 ProSitePatterns E1-E2 ATPases phosphorylation site. 381 387 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1131 Psa-Chr6 44241122 44253084 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1131 1 655 Primary Pumps ATPases AT5G44240 84.122 0.0 1184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1131 K01530 - gmx:100786505 1263.06