Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1112 ATGGTTTTATCAAAACATTATCAACTTTCATTTTCAATCACCTTCCTTCTATGTTTCCACTTAGCAAATTCTCAGATCATTGATGTTCCAATATTATCTCCAATATTAACTCCATTAGTCCCTAACATATTAAACTTCTTAGACCAAAGACTCGAATTAGTTTTCTCAATCATTCAATCCTTCAAAAACACAATAACCTCAGATCCGTTAGGAATAACATCAACATGGGTTGGTTCTGATATATGTATCTACAAAGGCTTCTACTGCGATAACCCGCCGGATAATCTCTCCGCCACCACTGTCTCCTCTGTTGATTTCAACGGCTTCAACCTCGCCTCCCCGTCTCTCGACAATTTCATCGGTCAACTCCCTGACTTAGCTCTCTTCCATGCAAACTCCAACAATTTCTCAGGTACCATTTCACCGAAAATAGCATCGCTTAAATATCTATACGAACTCGATCTAAGTAACAACATGTTCTCCGGAACATTTCCAACCTCGATCCTAAACATGCCAACACTTTCGTTTTTAGACATTAGGTTCAACCAATTCACCGGAGCAGTTCCTCCGGAGATCTTCTTCAAAACACTGGATACAATTTTTCTCAATAACAACAACTTTCTTCTCACACTTCCAGACAATATAGGCGAAACAACAGCAGCTTATATCACATTCGCTAACAACAATTTCTCCGGTCCGATTCCTCCAAGCATAGGAAAAGCCTCACCCACTTTAATCGAAGTTTTATTATTAAACAACCAATTAACAGGTTGTTTACCTTACGAAATAGGATTCCTTGAAAACGTTGAACTTTTCGACGCCAGTAGTAACCTTTTAACAGGTCCGATACCGTGGTCGTTTGCGTGTTTGAAGAAGGTGGAAGAGTTACACTTTTCTAGGAACATGTTGTATGGTCAGGTTCCAGAAGTGGTTTGCGCGTTGGAGAATTTGTCGAATTTAACATTGTCATATAACTATTTTAACAGATTGGGTCCATTATGCAGAAAGCTTGTAACAGACGGTGTGCTTGATGTGAAGAATAACTGTATTTCCGATCTTCCTGATCAAAGATCGATGGAGGAGTGTGTGAAGTTCTTTTCTATTCCGAGAACTTGTCCGCATCCTGGAATGTTTAATGTTATACCGCCGTGTCAGACTCCAGCACCGGCAAAACCACCGGAAAATAAGAGGAAATTGTTGTCATATTCAGCTCTTGAGAGAAACAGAATGGTTCTGATTTGA 1242 0.3969 MVLSKHYQLSFSITFLLCFHLANSQIIDVPILSPILTPLVPNILNFLDQRLELVFSIIQSFKNTITSDPLGITSTWVGSDICIYKGFYCDNPPDNLSATTVSSVDFNGFNLASPSLDNFIGQLPDLALFHANSNNFSGTISPKIASLKYLYELDLSNNMFSGTFPTSILNMPTLSFLDIRFNQFTGAVPPEIFFKTLDTIFLNNNNFLLTLPDNIGETTAAYITFANNNFSGPIPPSIGKASPTLIEVLLLNNQLTGCLPYEIGFLENVELFDASSNLLTGPIPWSFACLKKVEELHFSRNMLYGQVPEVVCALENLSNLTLSYNYFNRLGPLCRKLVTDGVLDVKNNCISDLPDQRSMEECVKFFSIPRTCPHPGMFNVIPPCQTPAPAKPPENKRKLLSYSALERNRMVLI* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1112 413 Gene3D Ribonuclease Inhibitor 56 220 IPR032675 -
Psa6g1112 413 PANTHER SCOPOLETIN GLUCOSYLTRANSFERASE 9 408 - -
Psa6g1112 413 Gene3D Ribonuclease Inhibitor 221 366 IPR032675 -
Psa6g1112 413 SUPERFAMILY L domain-like 57 351 - -
Psa6g1112 413 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 9 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1112 Psa-Chr6 43185149 43187065 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1112 46 369 Leucine-rich Repeat extension Gene Families AT3G24480 44.444 1.09e-90 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1112 - - gmx:100813314 559.681