Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1102 ATGGCTCTCTGCAAGATTCATGTTTCATCATCCCCATCTTCTTCTGTTGCTACTCTTTCTTGCGGAACAAATGTAGGTGATTATCTACCACTTGGTTCTCGTTCTTGTGGAACACACAAACGAAAAGACCGACATCAAGAAAGTAACAACATTTCCTCATTATTGGATTTGTCTTCATATCCCAATGAAACTAATGTCTGTCTCCACCTATCTCTATCTTTTTGTAATTGCATTCAAATTGCTAAGAAACAGAAACTTGTTCAGCAAGAAACCAATGTTACTGTTACTGTTGGAACAAGTTCTGATTCTTCAACTACCGATGATGATCCATGGAAGATCAAGAAGGTGCTCACATTAAGTGATCTTGGCAATAATAGCAGACTTTTGTTGAAGAAAGAATTGGCTAGGAAATGGGTCGTTCCTTTTTTGGATAAGGTCGAAGCTGAAAAAGATGGCGTTAAAGTTCCGGTGTTTGATGTTGACACTCAAACCCTACGTTCTCTTGTTTTCAAGATATGGCCTTCGAATGGAAGTCATGTTTTCATCGATACATGGATCACGAATTTTGTAGTTAAAAGGAATTTAAAGACTGGAGATGAAATTGGTCTTAAATGGGATCAAGCCGGAAAGAAATTTGATTTTTCTGTTCTTCGTAGATGTTGGATATAG 669 0.3752 MALCKIHVSSSPSSSVATLSCGTNVGDYLPLGSRSCGTHKRKDRHQESNNISSLLDLSSYPNETNVCLHLSLSFCNCIQIAKKQKLVQQETNVTVTVGTSSDSSTTDDDPWKIKKVLTLSDLGNNSRLLLKKELARKWVVPFLDKVEAEKDGVKVPVFDVDTQTLRSLVFKIWPSNGSHVFIDTWITNFVVKRNLKTGDEIGLKWDQAGKKFDFSVLRRCWI* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1102 222 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Psa6g1102 222 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 41 219 - -
Psa6g1102 222 Gene3D - 106 218 IPR015300 -
Psa6g1102 222 CDD B3_DNA 111 218 IPR003340 GO:0003677
Psa6g1102 222 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 41 219 - -
Psa6g1102 222 SUPERFAMILY DNA-binding pseudobarrel domain 108 217 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1102 Psa-Chr6 42725871 42726791 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1102 113 212 B3 DNA Binding Superfamily AT3G24650 30.000 6.90e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1102 - - mtr:MTR_1g045700 154.066