Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1026 ATGGAATCTCGATTAGTTGATGGAAACTGTAGAATGAAAGATTGTGGAGATGCTGGTTTGGGCATGTTGGAACCAAACGATGGGCGTAGATTGCTAGAGAGTTATTCCGATAGAGAGTTTGGCATCTCTTGTCACGACCTTTCTATACAAGAACCGTACGAAGGCATGGAATTTATATCCGAAGACGCTGCTAAAATATTCTATGATGAATACGCCCGACATGTAGGATTTACCATGCGCGTGATGTCTTGTCGACGCTCAGAAAGAGATGGTAGGATTCTTGCCCGCAGGCTTGGATGCAACAAGGAGGGTCATTGCGTTAGCATTCGAGGGAAACTTGGGCCGGTTCGGAAACCAAGGGCCAGCACAAGAGAAGGCTGTAAGGCAATGATTCATGTCAAGTTTGATAAGTCCGGAAAATGGGCGATAACGAAGTTTGTGAAAGATCATAATCATCCATTAGTAGTCTCTCCACGCGAAGCGCGCCAAACAATGGATGAGAAGGATAAGAAAATTCAGGAACTAACGACAGAACTTCGGATGAAAAAACGGTTGTGTGTAACATATGAAGAACAATTAACATCTTTTATGAAAATTGTGGAAGAGCACAGTGACAAACTGTCTAGTAGAATTCATCAGATACTTGATAATCTTAAAGAATATGAATCCAGAGAAGAGTTTTTGCATCAGTCATAG 696 0.421 MESRLVDGNCRMKDCGDAGLGMLEPNDGRRLLESYSDREFGISCHDLSIQEPYEGMEFISEDAAKIFYDEYARHVGFTMRVMSCRRSERDGRILARRLGCNKEGHCVSIRGKLGPVRKPRASTREGCKAMIHVKFDKSGKWAITKFVKDHNHPLVVSPREARQTMDEKDKKIQELTTELRMKKRLCVTYEEQLTSFMKIVEEHSDKLSSRIHQILDNLKEYESREEFLHQS* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1026 231 Pfam FAR1 DNA-binding domain 67 155 IPR004330 -
Psa6g1026 231 Coils Coil 165 192 - -
Psa6g1026 231 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 27 230 - -
Psa6g1026 231 Coils Coil 204 224 - -
Psa6g1026 231 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 27 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1026 Psa-Chr6 39670615 39672828 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Psa6g1026 FAR1 6.4e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1026 - - gmx:100787741 362.844