Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0978 ATGGCAGAAACATGTGATAAAATGATCAAAGGGATACGCAAATTGAAGCCTTACCTTGCCATGGTGTCCCTCCAATTTGGTTATGCAGGAATGTATATCATCACTATGGTTTCATTCAAACATGGCATGAGTCATTGGGTTCTCTCCGTCTACCGTCATATTGTCGCTACTATCTTCATGGCTCCCTTCGCTCTTGTCCTCGAAAGAAAAATTAGGCCAAAGATGACACTCCCAATTTTCTTGAGGTTGGCTGTTCTTGGTTTCCTTGAACCAGTGCTGGATCAAAATTTGTACAACCTGGGAATGAAGAATACTTCAACAACGTTTGCATCTGCCACTGTCAACATTCTTCCAGCTATTACTTTTATAATGGCAATCATTTTCAGGTTGGAAACGGTGAACTTCAGAAAAATCCACAGCGTAGCAAAAGTTGTTGGAACAGTTGTAACTGTATCAGGAGCAATGGTGATGACTTTGTACAAAGGTCCTGCCCTTCAAATCATAAAGGGTCATGCAGGAAGTCAACATCAAAGTGGAAGCACCGAACCCTCTGAACAAAATTGGGTGATTGGCACTGTTATGCTCATTTCAAGTTGTTGCGGTTGGGCTAGTTTCTTTATCTTGCAATCTTTCACTTTGAAGATGTATCCGGCGGAGCTTTCTATGACGGCATGGATTTGCTTTTTGGGAATTTTTGAAGGTGGAATTGCAACATTTATATTTGAACGTGACATGAGTGTATGGTCATTAGGGTTTGACTCTAGGCTTCTTGCATGTGTTTACTCTGGTATTGTGTGCTCCGGAATGGCTTATTATATACAAGGTGTTGTGACTAGAGAACGTGGACCTGTGTTTGTTACTTCTTTCAGTCCTTTATGTATGATCATCACTGCTGCATTGGGTTCTCTTGTCTTAGCTGAACAAACTCATTTGGGAAGTATAATTGGAGCTATTATCATTGTGTGTGGACTTTACACTGTGGTGTGGGGGAAAAGCAAAGATAGTGTGAATACAATTGAAGCAACACAAAGTGAGGGACAAGAGTTGCCAATAAAGGATGGAACAAGAACAGGGTCAGATATTTTTGAAAGTATTGAGGTCAATGTTCCTAAGGTTGGAGGAAAGAATAATGGCAAACCATAA 1143 0.4068 MAETCDKMIKGIRKLKPYLAMVSLQFGYAGMYIITMVSFKHGMSHWVLSVYRHIVATIFMAPFALVLERKIRPKMTLPIFLRLAVLGFLEPVLDQNLYNLGMKNTSTTFASATVNILPAITFIMAIIFRLETVNFRKIHSVAKVVGTVVTVSGAMVMTLYKGPALQIIKGHAGSQHQSGSTEPSEQNWVIGTVMLISSCCGWASFFILQSFTLKMYPAELSMTAWICFLGIFEGGIATFIFERDMSVWSLGFDSRLLACVYSGIVCSGMAYYIQGVVTRERGPVFVTSFSPLCMIITAALGSLVLAEQTHLGSIIGAIIIVCGLYTVVWGKSKDSVNTIEATQSEGQELPIKDGTRTGSDIFESIEVNVPKVGGKNNGKP* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0978 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 332 - -
Psa6g0978 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 152 - -
Psa6g0978 380 PANTHER WAT1-RELATED PROTEIN 12 357 IPR030184 GO:0016021|GO:0022857
Psa6g0978 380 PANTHER WAT1-RELATED PROTEIN 12 357 - -
Psa6g0978 380 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020|GO:0016021
Psa6g0978 380 Pfam EamA-like transporter family 29 150 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0978 Psa-Chr6 37372762 37376840 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0978 12 361 Nodulin-like Gene Family AT1G44800 64.306 1.00e-169 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0978 - - gmx:100814921 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0978 6 37372762 37376840 Psa6g0978 6 37372762 37376840 ECH