Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0971 ATGAACAACCCCTGCGATCTCGGCACACCTAATTCCCAATCAGTAGTTGAACAAACCGAAGAGCTTCAAGCATCATGTGCGTCCAAAATCACCAACAAGAAAAGGAAATCCCCAGGATTAACCACTCCTCAGAAGAAATCCTCCAGGCCGAGGAAAAAAGCTTTGGATAGTGGCGGTAAGGGGAGTACTTTGCCTAATGTGTATAGGAAGATTGATTTGCGGTTGGAGGAGAAGTTGTCTGCTGAGGAAAATTCAAAGATGTTTGCGGGTCGGCAAATACATCCGTTCTTTTCATCGTGGAAGGTGGAGAAGAAATCTAGGGATTCAGCTGGTTCAGAAGGCTGTTTGTCTGATGCTAAGGGGAGGAGTGGAAGAACTATCTGCGGCCCTATTCATGTATTTGAAGATATTCGGGATTATACTTCATCTCTTGACTGGAGTGACTGGAAATTTTTGGGAAATACCACTGTTGTGGATTGTGGTCCAGAAAGTTCAAATTTATCTGTTATGGAGGGTTCTGTTGAATCCTTAAATTTTGATAACTTTCTTAGTGGTGTAAAGCCCTCGAGCACTTCAATTTCTCAGAATGCATTGTCTTATTCAGATAAGCTATCTACACTGTCAGAAATAATGAAGGAAATGTCACCAGAAAACTCAGCTGTGCTAGCTAATGAGCAAGCAACATGCACTTTAAAGCCGAAAAATGCCATAGTGGACTTGGAGATGGATGATGACAGTACTGTATCTGGGCAAGCGTGCATTTTTGGAAAATCAGATACCGAGCCACCGAGTATGTTTCTTCGAGAAAGAATGAGCACTTTCTGCCATAGTTGTGAAGATAAGGCTGAGAGCAGCTTATGGATACACAAGTACAAACCAACAAAAGCCTCAGAGGTTTGCGGTAATAGTGAATCCCTGAAATTCTTGCGTGACTGGTTACATCTTTGGCATGAAAGACGTTACCAAAACAAAAAGGGTTCCTCTAACAAGGATCATAGTGACATACCAAATGTTGATAGTGATTATAACTGTCCTGATGGTGGCTATGCTTCAAAAGATGAGGGTTCCCTGAAGAATGTTCTTTTAATTACAGGACCAGTTGGGAGTGGCAAATCTGCAGCTGTATATGCTTGTGCCCGAGAGCAAGGGTTTGAAGTTTTAGAGCTCAATGCATCAGACTGTCGAAATGGGGCTGCTGTCAAGCAGTATTTTGGAGACGCTCTTGGATCGCATGGTGTCAAAGGGTTAGTGAAACACTCTGTGAGTTTAGAGAAGAAAACTGTGAAATTGCTGCCAGCTTCAGCTTCGCCTAATGTGAAAGCAGATGAAGAGATGGCTGATGATATGATTGAAATGATAGCTATATCCGATGATGGAACTCATAGTCCTGGTGGAACATTTCAGAAGTTGCACGACATTAATGATGCACTTACATTTGATACTGTCCAAACTTTAATTCTAGTTGAGGATGTTGACATCCTTTTTCCTGAAGACCGTGGATGTATTGCTGCCATACAACATATTGCCGAGACAGCAAAAGGGCCAATTATACTGACCAGCAACAATTATAATGCTGGCCTGCCAATTAATCTCTGTCGACAACGCGTTTCTTTCTCTTTGCCATTGCCGGATGAGTTGCTTTGCCATTTGTTCATGGTTTGTGGCACAGAAGAAGTCAACTTCAATCCTCTTTTACTAGAGAAGTTTATCCATTTTTGTGACAGAGATATTCGTAAAACCATTATGCATCTTCAGTTCTGGCTGCAGAATAAAAAATATAGCACAGATAAGAAAGTGCAGACACTATATGGCTCACTTCCTTTTGATCTTGAGGCTGCTCATGAGATACTACCAAAGATGATACCATGGAGTTTTCCCTCAGAGTTATCTAAACTAATTGAGAATGAAGTTTCCAAGTCAATAACCATAGCAGAAAATAACTCAAGGTGGGAAGGATTAGTTAACGAAGAGCTTTGCATAAATGACGAGAAAAATAGCTTAGATGTGCAGTGTACGGGAACTGGTTATTTAGAGCCCAAGGTAGAGGTTATGAAGAGAATTGGACCTATTACTGACTGCAGTGAGTTTGATAGTCAATATAGTGCTATCACTGAGCTTAGTAATTGTTCTGGATCCCCAGTAACATCATCTTTGCAAAAGGACCAAGGTCAACTTTTTGTGATGTCCTCTGATGATATGGATAAGGATCCAAATAATAGACATACTGTAGATGTTCATGACGAAGCTTACACGAGACAGACCCATGAAGGCAACACTGAATCTTTCTTTAAGTTTTTATTGAATCAAAGCTATGCCAACATGTCTTTTTGCGAGCTGCTGCGTTCTAGTTTGGAAGATTCAGAGGAGGAACATTGTAAATATTTAGACACAACTTATGATGCATGCTTAAACAAAACACATAAATCACCTGATCTGGCCCAGTTTTCAGAACCATGCTTTGTTTCTGAGACTGCAATTCAAAATAGAATAGAAACAAAATTTGGAGTAGAGTCTTCTGGGCAGCTTGCCTGTCCAGTAGATGTTTCTCTGGATGATGAACTGAAACCATTCTCTCCCAGGGTTTGTCAGCGCCTGGCCGAAGTGCCTCAAGATCCCGATTTTTTGGTGAATACTGAAATTCCCAAATCTTCTCCAAGAGCAACTTCACAAGATTTTACTGATGTGAACATGGAAATTGCATCTGCATCTGTTTATAACACGATGGATGAGTGCAGTCAAACTGATTCAAAGTTGGAGTCAAAGTGTGTTGACTGTCCATCTATTGAGATCGATATGGTGCAAAATTCGTGGAGGAAACTTCGTGATTGTCGAACAGATTTAAGACAGCATGCCACCTCAGAACAGATAGGTGCTATCGAAGTTGTTAAACTTGCTAGTGGGCTGAGCGATCTAATTTCAGAAGCTGACTTGTTGTTTCGTAATCACCAGCAAAAACAGTGTGGTATTATGGAACCTCCAGTTTTCCTGGCTGATGATGCCACATTTAGTTGGTATGATGAGCAAATGATGATGTCAACGGTTGCTGTACATGGTTTCTGCTTTCATGCCAAGCAAATAGTTGACGCTGGATCCAAATTCGGTTTTGAGAACAGGGTAGACGTAGCTTCAGAGATGTTGGCTTCTACTACAAATATTATGGCTTTGGGGAAGTTATCTAGACAGGACCACACCAAAACAATACATAGCTATACTAAAGAGCTATTAGAGATGAACAACACAAGAAACGATAAAAAGAGTATGCAATACAACGAAAGCAGAACACCTCTGTTCAACGTAATCCGATCCATTGTTCCTAAAAGATCATCATCTGCAATTAAAGGCATTGCATTCAATGAATTCCTTTCTTCACTACGCCACATTTCAATTTCAGAGGGTTTCCGAATGTCACAAGGTGTTAAAAATATGAGAAAAGGAAGGCGAAGCGCTCAACATTATTTGAGCAGAGGTAAAATGATGTTGTCTCCTGAGGATATATCATTGATGTGTGAAGGTGATTTGTACAGAAAGATATCTTCACAGTATGCTGCTAACATGGAAAATAACACTACATGA 3573 0.4064 MNNPCDLGTPNSQSVVEQTEELQASCASKITNKKRKSPGLTTPQKKSSRPRKKALDSGGKGSTLPNVYRKIDLRLEEKLSAEENSKMFAGRQIHPFFSSWKVEKKSRDSAGSEGCLSDAKGRSGRTICGPIHVFEDIRDYTSSLDWSDWKFLGNTTVVDCGPESSNLSVMEGSVESLNFDNFLSGVKPSSTSISQNALSYSDKLSTLSEIMKEMSPENSAVLANEQATCTLKPKNAIVDLEMDDDSTVSGQACIFGKSDTEPPSMFLRERMSTFCHSCEDKAESSLWIHKYKPTKASEVCGNSESLKFLRDWLHLWHERRYQNKKGSSNKDHSDIPNVDSDYNCPDGGYASKDEGSLKNVLLITGPVGSGKSAAVYACAREQGFEVLELNASDCRNGAAVKQYFGDALGSHGVKGLVKHSVSLEKKTVKLLPASASPNVKADEEMADDMIEMIAISDDGTHSPGGTFQKLHDINDALTFDTVQTLILVEDVDILFPEDRGCIAAIQHIAETAKGPIILTSNNYNAGLPINLCRQRVSFSLPLPDELLCHLFMVCGTEEVNFNPLLLEKFIHFCDRDIRKTIMHLQFWLQNKKYSTDKKVQTLYGSLPFDLEAAHEILPKMIPWSFPSELSKLIENEVSKSITIAENNSRWEGLVNEELCINDEKNSLDVQCTGTGYLEPKVEVMKRIGPITDCSEFDSQYSAITELSNCSGSPVTSSLQKDQGQLFVMSSDDMDKDPNNRHTVDVHDEAYTRQTHEGNTESFFKFLLNQSYANMSFCELLRSSLEDSEEEHCKYLDTTYDACLNKTHKSPDLAQFSEPCFVSETAIQNRIETKFGVESSGQLACPVDVSLDDELKPFSPRVCQRLAEVPQDPDFLVNTEIPKSSPRATSQDFTDVNMEIASASVYNTMDECSQTDSKLESKCVDCPSIEIDMVQNSWRKLRDCRTDLRQHATSEQIGAIEVVKLASGLSDLISEADLLFRNHQQKQCGIMEPPVFLADDATFSWYDEQMMMSTVAVHGFCFHAKQIVDAGSKFGFENRVDVASEMLASTTNIMALGKLSRQDHTKTIHSYTKELLEMNNTRNDKKSMQYNESRTPLFNVIRSIVPKRSSSAIKGIAFNEFLSSLRHISISEGFRMSQGVKNMRKGRRSAQHYLSRGKMMLSPEDISLMCEGDLYRKISSQYAANMENNTT* 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0971 1190 MobiDBLite consensus disorder prediction 27 45 - -
Psa6g0971 1190 MobiDBLite consensus disorder prediction 27 61 - -
Psa6g0971 1190 MobiDBLite consensus disorder prediction 1 20 - -
Psa6g0971 1190 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 1 1186 IPR004582 GO:0006281
Psa6g0971 1190 CDD AAA 358 405 - -
Psa6g0971 1190 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 285 605 IPR027417 -
Psa6g0971 1190 Gene3D - 284 539 IPR027417 -
Psa6g0971 1190 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 1 1186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0971 Psa-Chr6 37239752 37247963 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0971 283 586 Core DNA Replication Machinery Family AT5G22010 22.727 4.30e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0971 - - gmx:100815984 1294.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0971 6 37239752 37247963 Psa6g0971 6 37239752 37247963 ECH