Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0969 ATGCCTGCCGGTCATGGTTTGCGATCACGTACCAGGGATTCCTTCTCTCGTCCCTTCCGCAAGAAGGGAACAATAGCTCTTGCCACATACCTCAGGACTTATCACATCGGTGACTATGTTGACATCAGGGTTAACGGTGCTGTTCATAAGGGTATGCCGCACAAATTCTACCATGGCCGTACCGGTCGCGTCTGGAACGTTACCAAGCGTGCCATTGGTGTCGAAGTCAACAAGCAGGTGAGGAACAAGATCTTGAGAAAGAGGATTCATGTTCGAGTGGAGCATGTTATGCCCTCCAGATGCACCGAGGAATTCAAATTGAGGAAGATCCAGAATGATAAATTGAAGGCTGAGGCTAAGGTCAAGGGAGAGGTTATCAGCACCAAGCGCAAGCCTGAGGGCCCCAAACCTGGTTTCAAGGTGGAAGGTGCAACACTGGAGACTGTTACTCCAATACCGTATGATGTTGTTAACGATCTTAAAGGAGGATATTAG 495 0.4889 MPAGHGLRSRTRDSFSRPFRKKGTIALATYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFKLRKIQNDKLKAEAKVKGEVISTKRKPEGPKPGFKVEGATLETVTPIPYDVVNDLKGGY* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0969 164 ProSitePatterns Ribosomal protein L21e signature. 37 62 IPR018259 GO:0003735|GO:0005840|GO:0006412
Psa6g0969 164 Pfam Ribosomal protein L21e 1 101 IPR001147 GO:0003735|GO:0005840|GO:0006412
Psa6g0969 164 Gene3D - 99 156 - -
Psa6g0969 164 Gene3D Ribosomal protein L21 1 97 IPR036948 GO:0003735|GO:0005840|GO:0006412
Psa6g0969 164 PANTHER 60S RIBOSOMAL PROTEIN L21 1 164 IPR001147 GO:0003735|GO:0005840|GO:0006412
Psa6g0969 164 SUPERFAMILY Translation proteins SH3-like domain 3 99 IPR008991 -
Psa6g0969 164 PANTHER 60S RIBOSOMAL PROTEIN L21-1 1 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0969 Psa-Chr6 37088077 37089511 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0969 1 164 Cytoplasmic Ribosomal Protein Gene Family AT1G57860 80.488 1.32e-100 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0969 K02889 - gmx:100500046 318.161