Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0964 ATGGGAGATTCCAAGGTTGAAACCATTTCACGATTAGCTCAATGGAAAATCGACAACTTCGGACCCTGTTCTTACAAGAAATCCGATCCTTTCAAACTCGGAATTTGGAACTGGTACTTGTCTATAGAGAGAAATAGGTATTTGTATATTCATCTGTTTCCTGAACATTCGCGTGTTTCTAAAGAACAGCCTCCTATTGCTCGGTTCATTCTTCGAGTTTCGAATACTGCTTCTTCTTCATCCTCCTCCTCCCGTAGATTTTATATTTCTCCTGTTCATGAAAGGGTGCTTAGAACATGTGACGACTTTGTCTGGCCTGTGGATACTACATTCCTTGGTCGCTTGATTATTGATGTTGAATTTCTTGACCTGAAGATCTATCCTCTGAATGGTGGAGAAGCCAGTTCTATATGGCCATCTGACGGAAAACTGCAATCTGTTGCAACTCAAAACACTCTCCGAAGCCTCTCTCGCATGCTTGACGAAGCTATACACGCTGATCTCACCATTATAACTGCAGACGGTACACTTAAGGCTCATAAGGCAGTTATGACCGCAACTTCTCCTTTGTTCGAGGCCTCATATCATGACAGCGACAATGAGAAAGAGTCATCTACAATCCACATAGAAAACATGTCACAAGAGTCCTGCACAGCCCTTCTGAGTTACATGTACGGAACAATAAAACCTGAAGATTTCTGGAAGCACAGGCTTGCATTGCTTGGAGCAGCCAATAAATACGAAATCAGTGATTTGAAAGATGCGTGCGAGGAAAGCCTACTCGAAGATCTTAACTCGGGAAATGTTCTGGATAGACTAAATGAGGCTTGGATGTACCAGCTGCACAAGTTGAAGAAAGGATGTTTCGCGTTCTTATTTGATTTTGGTAAGATATATGATGTTAGAGATGAAATAAATACGTTTTTTCGCCATGCAGAAAGGGAGCTAATGTTGGAGATGTTTCAAGAAGTGCTTACAATTTGGAAATAG 990 0.4152 MGDSKVETISRLAQWKIDNFGPCSYKKSDPFKLGIWNWYLSIERNRYLYIHLFPEHSRVSKEQPPIARFILRVSNTASSSSSSSRRFYISPVHERVLRTCDDFVWPVDTTFLGRLIIDVEFLDLKIYPLNGGEASSIWPSDGKLQSVATQNTLRSLSRMLDEAIHADLTIITADGTLKAHKAVMTATSPLFEASYHDSDNEKESSTIHIENMSQESCTALLSYMYGTIKPEDFWKHRLALLGAANKYEISDLKDACEESLLEDLNSGNVLDRLNEAWMYQLHKLKKGCFAFLFDFGKIYDVRDEINTFFRHAERELMLEMFQEVLTIWK* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0964 329 ProSiteProfiles BTB domain profile. 166 225 IPR000210 GO:0005515
Psa6g0964 329 SUPERFAMILY POZ domain 148 262 IPR011333 -
Psa6g0964 329 PANTHER OS08G0103600 PROTEIN 1 329 - -
Psa6g0964 329 PANTHER OS08G0495500 PROTEIN-RELATED 1 329 IPR044714 -
Psa6g0964 329 Gene3D Potassium Channel Kv1.1; Chain A 140 293 IPR011333 -
Psa6g0964 329 SMART BTB_4 166 264 IPR000210 GO:0005515
Psa6g0964 329 Pfam BTB/POZ domain 159 262 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0964 Psa-Chr6 36943222 36946867 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Psa6g0964 BTB 2.2e-18 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0964 K10523 - gmx:100775687 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0964 6 36943222 36946867 Psa6g0964 6 36943222 36946867 ECH