Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0963 ATGGCATCTTCTACAGCCAAAACCAAAGTGTTTGATTCAGAAGAAGCTTTAGCAACGGTTAAGAATCTGAGAGAAGCGTTTGAGTCTGGTAACACTCGAAGCTACGAATGGAGAGTTTCTCAGTTGAAAGCTCTTTTGGAAATAAGTGAAAAGCATGAGCAACAGATTCTCGATGCTCTTTTCTCTGACTTATCCAAATCTGAAGCTGAAGCCTTCATCCAAGAGATTGCTATGTTGAAAAACTCGTGTAAAACTGCAATTAAGGAATTGAAGCATTGGATGACTCCGGAAAAGGTCCGAACATCCCTCACTACATTTCCTGCTTCAGCTGAAATAGTGTCTGAACCACTCGGAGTTGTGTTGGTCATTTCTGCATGGAACTATCCATTTTTGCTGTCACTTGATCCAGTCATTGGAGCTATTGCAGCCGGTAATGCTGTCGTCTTAAAACCATCAGAAATTGCTCCAGCCACATCAGCATTGCTGGCAAAACTGGTAGGGGAGTACATGGATAACTCATCTATAAGAGTTGTTGAGGGAGCAGTTGATGAAACATCTGCATTACTGCAACAAAAGTGGGATAAAATTTTCTACACAGGTAATGGAAGAGTGGGACGCATCGTGATGGCGGCTGCTGCTAAGCACCTTACACCAGTTGTGCTGGAGCTTGGAGGAAAATCCCCTGTTGTTGTTGATTCAAATTCAAATATCAACTTACAGGTTACGACTAGAAGGATAATTGCTGGAAAATGGCGGTGCCAACAATGGACAAGCTTGCATTTCTCCCGATTATATTATAACACAAAAGACATGCTCCTAAGTTGGTGGATGCTCTAA 837 0.4229 MASSTAKTKVFDSEEALATVKNLREAFESGNTRSYEWRVSQLKALLEISEKHEQQILDALFSDLSKSEAEAFIQEIAMLKNSCKTAIKELKHWMTPEKVRTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSALLAKLVGEYMDNSSIRVVEGAVDETSALLQQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSNSNINLQVTTRRIIAGKWRCQQWTSLHFSRLYYNTKDMLLSWWML* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0963 278 Pfam Aldehyde dehydrogenase family 6 263 IPR015590 GO:0016491
Psa6g0963 278 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 224 IPR016162 GO:0016491
Psa6g0963 278 SUPERFAMILY ALDH-like 18 265 IPR016161 GO:0016491
Psa6g0963 278 PANTHER ALDEHYDE DEHYDROGENASE 5 254 IPR012394 GO:0006081
Psa6g0963 278 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC 5 254 - -
Psa6g0963 278 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 221 228 IPR029510 GO:0016491
Psa6g0963 278 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 225 264 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0963 Psa-Chr6 36879685 36898468 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0963 11 271 Aldehyde Dehydrogenase Gene Family AT4G34240 63.985 5.86e-109 323
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0963 6 36879685 36898468 Psa6g0963 6 36879685 36898468 ECH