Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0962 ATGAGTGAAGAGATATTTGGTCCTTTACTTCCCATCATCACGGTGGATAGAATAGAAGAAAGCTTTGAAGTGATAAATTCAGGACCAAAGCCTCTTGCTGCATATATATTTACCAACAATAAGAATCTCAAGGAGCAGTTTGTTAAGACGATTTCCGCTGGTGGTTTGGTCATCAATGACACTACTATACACCTTGCAGTTCATACTCTACCTTTTGGAGGAGTAGGTGACAGTGGAGTTGGTGCATACCATGGAAAATTCTCTTTTGATGCATTTAGCCACAAAAAAGCAGTTCTTTATCGCAGTTTTTTTGGTGATGCTTCTATAAGGTATCCACCATACACCAAAACAAAGTTTAGATTGATGAAGGCTCTCATGACTGGTAGCATAGTTGGTATAATTCGTGCTATATTTGGAAAGTCCTAG 426 0.3873 MSEEIFGPLLPIITVDRIEESFEVINSGPKPLAAYIFTNNKNLKEQFVKTISAGGLVINDTTIHLAVHTLPFGGVGDSGVGAYHGKFSFDAFSHKKAVLYRSFFGDASIRYPPYTKTKFRLMKALMTGSIVGIIRAIFGKS* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0962 141 SUPERFAMILY ALDH-like 1 124 IPR016161 GO:0016491
Psa6g0962 141 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 1 78 IPR016163 GO:0016620
Psa6g0962 141 Pfam Aldehyde dehydrogenase family 1 98 IPR015590 GO:0016491
Psa6g0962 141 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 79 96 IPR016162 GO:0016491
Psa6g0962 141 PANTHER ALDEHYDE DEHYDROGENASE 1 141 IPR012394 GO:0006081
Psa6g0962 141 PANTHER ALDEHYDE DEHYDROGENASE 1 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0962 Psa-Chr6 36878630 36879373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0962 1 139 Aldehyde Dehydrogenase Gene Family AT1G44170 68.345 9.29e-71 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0962 K00128 - gmx:100816594 243.817