Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0913 ATGTCGTTGATTATATCGTCGGAGTTGGCTGATGCGTCGTACAGGAATGCCAAACTGTACTCGTTAAAGGGAACAGATGTTGCACCTGGTTTGTCCTCCCATAATTTCGTTCCTGATAAGCACAGAAGCATGTACATGAATGAGTCTTACTCGAGTGAGAGTTATGAAAAGTACTTCCTTGATTCACCTACGGAAGAACTGATAGAACCGTCGAGTTCTGGTGTATCGGGAAATTCAATTCATGCTGATTGTGATTCTTACCAGATCAGAGCTAGTTCTGGAACTTCTGTGGTCACTGATAACCCGTTTGATACTTATGTTTCATCGACAAGGCTTCATGATGCCTATCAGTCGAACTTTGAATCAGATTTATTGGAAAACGAGAGCCCGGATTGCTTTGAGTTTGATGGTGAAATGCGATTGAAGCTGCAAGAATTGGAGAGAGCGTTGCTTAGTGACAATAATGATGATGACGACGATGATGACGAAAACATGTTTAGAACTGTACAAAGCATGGACATTGATCCCGACTTTGCTGAGTGTGCCAATCTCGTTCAGAACATGTCACATCATGACTCGCCAAAGGAATCCTTGTCATCAGATTCGAATCTTAGTACCAGCAGTTGCACCAAAGAAATATCACAAATCTCTCCCCGGACGCCGAAGCAATTACTTTATGAATGTGCTTGTGCACTTTCAGAAGGAAATGAAGGAAAAGCCTCGGCTATGATAGATGATCTAAGGCAGATGGTTTCGATTAATGGAGATCCTTCAGAAAGAATTGCGGCCTACATGGTTGAAGGGCTTGCGGCTCGTTTGGCTTCGTCTGGAAAATGCATTTATAAAGCTTTGAAATGCAAGGAGCCTCCTTCTTCCGACCGTCTAGCATCAATGCAGATCCTATTCGAGGTGTGCCCGTGTTTTAAATTTGGATTTATCGCAGCAAATGGTGCCATTGCTGAGGCTATTAAAGATGATAAGAAGGTTCACATAATAGATTTCGATATCAACCAAGGAAGCCAATATATAACCCTAATACAAACACTTGCTTCTAGGCCAGGTAAGCCGCCTTTTGTGAGATTGACCGGCGTTGACGATCCTGAATCCGTGCAACGATCTGTTGGAGGCCTAAGTATCATAGGACAAAGGCTTGAAAAGCTTGCAGAAGTACTCGGATTGCCATTTGAGTTTCGAGCCGTAGCATCAAGTTCTTCAATTGTTACTCCATCAATGCTGAACTGTCGGCCGGGGGAAGCAATCGTGGTGAACTTTGCATTCCAGCTTCATCACATGCGCGACGAAAGTGTATCAACAGTAAACGAACGAGACCAGCTTCTTCGCATGGTCAAGAGCCTCAAACCAAAACTTGTAACCGTCGTGGAACAAGACGTGAACACAAACACTTCCCCGTTTCTCCCTAGATTCGTCGAAGCCTACAATTACTACTCTGCTGTGTTTGAGTCACTCGACGCCACTCTTCCAAGAGAGAGCCAAGATAGGGTGAATGTTGAAAGGCAATGCTTGGCAAGGGACATTGTCAACATCATCGCGTGCGAGGGCGAAGAGAGAATAGAACGATACGAAGTTGCTGGAAAATGGAGAGCGAGAATGAGAATGGCTGGCTTCACTTCATCACCAATGAGTACAAATGTGGAAGAAGCAATAAGGGAACTCATTAGGCAGTACTGTGACAAGTACAAGATAAAAGAGGAAATGGGAGCACTTCATTTTGGGTGGGAGGACAAAAACTTGATTGTTGCTTCAGCATGGAAGTGA 1776 0.4414 MSLIISSELADASYRNAKLYSLKGTDVAPGLSSHNFVPDKHRSMYMNESYSSESYEKYFLDSPTEELIEPSSSGVSGNSIHADCDSYQIRASSGTSVVTDNPFDTYVSSTRLHDAYQSNFESDLLENESPDCFEFDGEMRLKLQELERALLSDNNDDDDDDDENMFRTVQSMDIDPDFAECANLVQNMSHHDSPKESLSSDSNLSTSSCTKEISQISPRTPKQLLYECACALSEGNEGKASAMIDDLRQMVSINGDPSERIAAYMVEGLAARLASSGKCIYKALKCKEPPSSDRLASMQILFEVCPCFKFGFIAANGAIAEAIKDDKKVHIIDFDINQGSQYITLIQTLASRPGKPPFVRLTGVDDPESVQRSVGGLSIIGQRLEKLAEVLGLPFEFRAVASSSSIVTPSMLNCRPGEAIVVNFAFQLHHMRDESVSTVNERDQLLRMVKSLKPKLVTVVEQDVNTNTSPFLPRFVEAYNYYSAVFESLDATLPRESQDRVNVERQCLARDIVNIIACEGEERIERYEVAGKWRARMRMAGFTSSPMSTNVEEAIRELIRQYCDKYKIKEEMGALHFGWEDKNLIVASAWK* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0913 591 ProSiteProfiles GRAS family profile. 212 591 IPR005202 -
Psa6g0913 591 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 10 590 IPR030011 GO:0003700|GO:0005634
Psa6g0913 591 Pfam GRAS domain family 222 591 IPR005202 -
Psa6g0913 591 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 590 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0913 Psa-Chr6 34420285 34423978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0913 1 591 GRAS Transcription Factor Family AT1G21450 62.189 0.0 698
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Psa6g0913 GRAS 3e-135 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0913 - - gmx:100807048 906.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0913 6 34420285 34423978 Psa6g0913 6 34420285 34423978 ECH
Psa6g0913 6 34420285 34423978 Psa5g1911 5 147247881 147250760 PCT