Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0912 ATGGTTATTTTTCTGCGTTTGCTATTTAATTATTTTCCAGTCCAAAAAAACACCCGTTTCGTTATTCACAGTAACAATAACAACCATAATCATGACGGCTACCTCCACCGAAACCCCTCTAACAAACTAAACTCCGCCGCACCTCCTCTTCTCCGCGGCTCACTTCCGGTGTGCAACAACCGCCACTTCCCGGTAGCAGCTTCCGCGAAAATGGAATCCTCAAAAAATCAATACGAATCCCTCTCTTCCATTGATGAAGATGATTCTACGTCTAACAAGTGCACCAATTTCTACGATATTTATGGCCCCGAGGCTAAAGCGGATGTTGTTTTCAAGTCACCGGAAGAAGATAGATCAACTCTGAATCTCTCTGACATTCAAGGACTTGTAACTTGGGTTCTCGGTGAAGGATTCATGCCATCATGGGTTTTTATCAAGAATAAACCTCTTATTCACAAAGTGGTTATGCTCTATATGCCAGGCCTGGATGCAGCTTTGTACTTGTCACTGTCCAGAACGCTTCCTAATCTAAAAAAATCGTGTGGCAAACCAAGACCAGTCCTTGCTCTCAGCTGTGTATCAGATAATATGCAGACAATAGACGCACTACTAACATGCAGGCAGAAAAGAAAAAGGGATCTAACTGGTTCAGTTACACCAAAATCTACTCAGACATCACAACAAGAAGAAGGCTGTAGTGCTACGCTCAATCTATCATTCACGGAGCTTATTAAAGACATACCTTTCCCTGTTACATACTATACACTAACAGAGAAAGATCTGGATGAGAATGGATATCCTGTTAATAAGCCAGGTTTTCTTTCTACTCTTCCCGCTCCTCCGGGGTCTCCTTTTCATGAGATGTTAGCAGTTGATTGTGAGATGTGCATAACAGGTGAGGGGTTTGAGCTGACAAGGGTTACTCTCGTGGATGTCAAAGGACAGGTTTTGTTAGATAAATTGGTTAAACCTTCAAATCCTATCATTGATTACAATACAAGATATAGTGGAATAACTGCTGAGATGTTAGATGAGGTGACAACAAGTCTGATTGACATTCAGAGAGAGTTTCAGAAACTGGTTTACCAAGAAACTATTCTTGTTGGGCATTCTTTGGAAAATGATTTATTAGCATTGAAGATATCACATGATTTGATCATTGACACGGCAGTATTATACAAACACCCCCGAGGGTCTTCCCATAAATCTGCTCTTCGGTTTCTTACCAAAAGATTTCTTTCAAGAGAGATACAGCAATCAGGGAATGGACATGACAGCATTGAAGATGCTAGAGCTACCATGGAATTGGCAGTATTGAAGATCAGAAATGGGCCTGACTTTGGTGCTCCTCCATCCTTTATGCGCAAAAAGCTCCTTTCCATTTTGAGTGAGTCTGGCAAAAATTCTTCAATGATTGATGACATATCCATTGTAAAACGATTTGCCTCGGACTCCTCTAATGCAATTCCAGTGACATCTGATGAAGAAGCACTTGCAAAAACCATCAAGGAGTTGAATAATGAAAAGGCGCATTTTATCTGGACTCAGTTTTCAGAGTTAGACTCATACTTGAAGAAACAAGCTGAGGATTCAGATAGCTTGAATAAAAAAATTGCAGAGATGATTGCATTACATACATGTCAGAAGAATCATTCAAACGGGAAAGGCCTCAAGCTGAATATATCTTCTGAACTGAAGGAAATTGTTACTCGCATGGATAATAAAATTCATAAACTGTATAAGTCATTACCAACAAATGCTATGATGATAGTTTGCACCGGTCATGGAGACACAGCAGTTGTTTGCAGGTTGAGGAAAATGCTTATGGAGGAGGGTGAAAGTAATTTTGGTCGTGAGAAGATTTTGGAAAGCTTGCAAGAGTTTCAAGCTAGAGCTGAAGTAGCCTTGTGTTTTGTAGGTGTAAAACACTGA 1932 0.4037 MVIFLRLLFNYFPVQKNTRFVIHSNNNNHNHDGYLHRNPSNKLNSAAPPLLRGSLPVCNNRHFPVAASAKMESSKNQYESLSSIDEDDSTSNKCTNFYDIYGPEAKADVVFKSPEEDRSTLNLSDIQGLVTWVLGEGFMPSWVFIKNKPLIHKVVMLYMPGLDAALYLSLSRTLPNLKKSCGKPRPVLALSCVSDNMQTIDALLTCRQKRKRDLTGSVTPKSTQTSQQEEGCSATLNLSFTELIKDIPFPVTYYTLTEKDLDENGYPVNKPGFLSTLPAPPGSPFHEMLAVDCEMCITGEGFELTRVTLVDVKGQVLLDKLVKPSNPIIDYNTRYSGITAEMLDEVTTSLIDIQREFQKLVYQETILVGHSLENDLLALKISHDLIIDTAVLYKHPRGSSHKSALRFLTKRFLSREIQQSGNGHDSIEDARATMELAVLKIRNGPDFGAPPSFMRKKLLSILSESGKNSSMIDDISIVKRFASDSSNAIPVTSDEEALAKTIKELNNEKAHFIWTQFSELDSYLKKQAEDSDSLNKKIAEMIALHTCQKNHSNGKGLKLNISSELKEIVTRMDNKIHKLYKSLPTNAMMIVCTGHGDTAVVCRLRKMLMEEGESNFGREKILESLQEFQARAEVALCFVGVKH* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0912 643 CDD REX1_like 289 437 IPR034922 -
Psa6g0912 643 Pfam Exonuclease 290 436 IPR013520 -
Psa6g0912 643 Gene3D - 285 445 IPR036397 GO:0003676
Psa6g0912 643 SMART exoiiiendus 287 446 IPR013520 -
Psa6g0912 643 SUPERFAMILY Ribonuclease H-like 288 441 IPR012337 -
Psa6g0912 643 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 84 628 - -
Psa6g0912 643 SUPERFAMILY Alkaline phosphatase-like 454 598 IPR017850 -
Psa6g0912 643 PANTHER LD29573P 84 628 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0912 289 436 C2H2 Transcription Factor Family AT2G48100 30.435 3.04e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0912 K14570 - gmx:100802793 898.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0912 6 34406732 34417800 Psa6g0912 6 34406732 34417800 ECH