Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0908 ATGGCTAAACCAAGCTCAAGACAAACCCCTTGTCTAGTCTTTCAATCAACACTTCTCTTTATAATTTCATCTCCATTATTTCCTCACTCAATTCTCTCTAGGAAGAAGAATCATACAAAGGAAGAGAAGAAGCAACACAGCTTTGAAAACATATCATATACTTGCTTTGCTTTACATCCAAATTTCTTTATTCAATCTACAAGAATGAGGAACAAGATGGCCCTTTTGTTCTTTTATTCAGAAACTTTCATAATTGGAGCAATGTTCTTTATTTGTATTGGAGCTGAACCAGTAGCAGATAAACAAGCTTTACTGGATTTCCTTCACAACATGAATCACTCCGCACATCTCAATTGGAACAAGAGTTCTTCTGTATGCAAAAAATGGACTAGAGTTACCTGCAATACGGAAAAATCAAGAGTTATATCCCTTCGGCTACAAAGTGTTGGACTGAATGGTTCAATTCCACCTAACACTCTTGGTAGACTCAAAGCACTTCAAAACTTGAATCTTGCATCAAATAATATAACTGGTTTCTTCCCTTCTGATTTCTATGAGCTGAAAAATCTGACCTTTCTTTTCCTCCAATTCAACAAGTTTTCTGGGCCATTGCCATTAGATTTTTCGGTTTGGAATAATCTTACTGTTGTTGATTTTTCCAACAATGGTTTTAATGGAAGCATTCCTTTATCAGTTTCAAATTTGACTCATCTCACTTCTTTGATTCTAGCTAATAACACTCTTTCAGGTGAAATTCCTGATATCAATATTCCTAGCCTCAAAGATCTCAATTTGGAAAACAATAATCTTAGTGGTGTTGTGCCTAAAACGCTTCATAGATTTCCAAGTTTGTCCTTTTCAGGTAACAATCTTACATTTGTGAATGTTTATCCTCCAAATTCTCATATAAAAAGGAAAAAACACAAAGGGCTTAAAGAACAGGCATTATTAGGTATCATCATTGGTGGTTGTGTACTAGGAATTTTAATCATAGCAGTTTTCTGGATTGTGTGCTGTTACAAGAAACAAGATGAAGCGGGACAACTTGTTAAGTCTCAGAAGAACAAAGAAGTTTTTTCTGATAAAAAAGAAGCTTCTGAGAGTCTAGAAAGAAACAAAATCGTCTTCTTTGAAGATTGCAATTATGTATTTGACTTGGAAGATTTGTTGAGAGCTTCTGCTGAGGTGCTTGGAAAGGGAACTTTTGGTACTGTTTATAAGGCTGCTTTAGAAGAGACAACGACAGTCGCGGTTAAGAGGCTGAAGGAGGTTACGGTTGGGAAGCGCGAGTTCGAACAGCAGATGGAGATGGTAGGAGGGATTAGGCATGAGAATGTGGCTGCTCTAAGGGCTTATTACTATTCAAAGGAGGAGAAACTTATGGTATATGATTTTTATGAACAAGGCAGTGTCTCAGCAATGTTGCATGGAAAAAGAGGGGCAGATAGAATTCCTTTAGACTGGGAAACCAGGTTGAGAATAGCAATTGGTGTAGCAAGAGGCATTGCACACATCCACGCAATAGAAGAAGGAAAACTAGTCCATGCAAACATAAAAGCCTCAAACATTTTCCTCAACTCTAAAGGGTATGGTTCCATATCTGACACTGGTCTAGCAACAATGATAATAACTCCAACATCTCCAAGGGCGTCAGGGTACCTTGCACCTGAAGTAACGGAAACTCGAAAAGCAACTCCGGCGGCTGACGTCTATAGTTTCGGTGTCTTGTTACTTGAACTTTTAACTGGAAAATCTCCTTTACATGTAGGTGAGGAAGTTGTTCATTTGGTTAGGTGGGTGAATTCTGTGGTTAGAGAAGAATGGACTTCTGAAGTGTTTGATTTGGAGCTATTGAGATATCCTAATATAGAAGAAGAAATGGTTGAGATGTTACAAATTGGTATGGCTTGTGTTGGGAGGATACAAGATCAAAGACCAAAAATGGATGAAGTTTTGAGAATGGTTGAAGAAATTCATAGGGGTAATAGTGGAAATAGACTTTCCACTGAATCTAGATCAGATGGTTCTACTCCAATAACTCCTCATGTAATAGAGACACCTATTTCTCTTCCACATTGA 2079 0.3766 MAKPSSRQTPCLVFQSTLLFIISSPLFPHSILSRKKNHTKEEKKQHSFENISYTCFALHPNFFIQSTRMRNKMALLFFYSETFIIGAMFFICIGAEPVADKQALLDFLHNMNHSAHLNWNKSSSVCKKWTRVTCNTEKSRVISLRLQSVGLNGSIPPNTLGRLKALQNLNLASNNITGFFPSDFYELKNLTFLFLQFNKFSGPLPLDFSVWNNLTVVDFSNNGFNGSIPLSVSNLTHLTSLILANNTLSGEIPDINIPSLKDLNLENNNLSGVVPKTLHRFPSLSFSGNNLTFVNVYPPNSHIKRKKHKGLKEQALLGIIIGGCVLGILIIAVFWIVCCYKKQDEAGQLVKSQKNKEVFSDKKEASESLERNKIVFFEDCNYVFDLEDLLRASAEVLGKGTFGTVYKAALEETTTVAVKRLKEVTVGKREFEQQMEMVGGIRHENVAALRAYYYSKEEKLMVYDFYEQGSVSAMLHGKRGADRIPLDWETRLRIAIGVARGIAHIHAIEEGKLVHANIKASNIFLNSKGYGSISDTGLATMIITPTSPRASGYLAPEVTETRKATPAADVYSFGVLLLELLTGKSPLHVGEEVVHLVRWVNSVVREEWTSEVFDLELLRYPNIEEEMVEMLQIGMACVGRIQDQRPKMDEVLRMVEEIHRGNSGNRLSTESRSDGSTPITPHVIETPISLPH* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0908 692 MobiDBLite consensus disorder prediction 662 692 - -
Psa6g0908 692 Gene3D Transferase(Phosphotransferase) domain 1 466 675 - -
Psa6g0908 692 ProSiteProfiles Protein kinase domain profile. 391 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0908 692 PANTHER OS05G0588300 PROTEIN 83 684 - -
Psa6g0908 692 Pfam Leucine rich repeat 144 200 IPR001611 GO:0005515
Psa6g0908 692 ProSitePatterns Protein kinases ATP-binding region signature. 397 428 IPR017441 GO:0005524
Psa6g0908 692 Pfam Leucine rich repeat N-terminal domain 99 135 IPR013210 -
Psa6g0908 692 SUPERFAMILY L domain-like 113 294 - -
Psa6g0908 692 Gene3D Phosphorylase Kinase; domain 1 355 465 - -
Psa6g0908 692 Gene3D Ribonuclease Inhibitor 98 308 IPR032675 -
Psa6g0908 692 Pfam Protein tyrosine and serine/threonine kinase 395 653 IPR001245 GO:0004672|GO:0006468
Psa6g0908 692 PANTHER LRR RECEPTOR-LIKE KINASE 83 684 - -
Psa6g0908 692 SUPERFAMILY Protein kinase-like (PK-like) 395 660 IPR011009 -
Psa6g0908 692 MobiDBLite consensus disorder prediction 662 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0908 Psa-Chr6 34165701 34168958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0908 95 669 Receptor kinase-like Gene Family AT4G23740 56.951 0.0 658
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Psa6g0908 PK_Tyr_Ser-Thr 1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0908 - - aprc:113851984 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0908 6 34165701 34168958 Psa6g0908 6 34165701 34168958 ECH