Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0899 ATGAAGGACGTGAAACGACACTCGCTGGAATCGTCTTTCTCTCGCGTTGAGGCGGTTAAGAAATTGGAGAATGTTCAGCGGAGAAGGTTGAAAATTCGGAGAATGAAGTATAGCTGTCAGGCGAAGATCCACGTCGGAGATGACTCTGCCGGTGGGGAGGAAAAGGAGTTTCATGAATCGGTTCAGATATCTTTGTCGTTGGCGAGCTCTTCGCCGTCGTCGTCATCGGAGGAAGAGGATCGATCGTCGAAGCGGAATGATGAAGATGAAGACGTATCGTATGGTTCGGTGTCGGTGATAGGGTGTAGGAAGGAAATGGAGGATGCGGTGAGTGTTGAGATTGGTTTTGCGGTGAAAGAAAATCAGAAGTGTGATTTCTTTGCTGTTTATGACGGTCATGGTGGAGCTCAGGTTGCGGAGGTTTGTAGAGAGAGGTTGCATCAGGTTGTGGCGGAGGAGGTGGAGAGATGTGTGAATGACGTGGAATGGAACTGGGAGAGAGTGATGGAAGGGTGTTTTGGTAAAATGGATAGAGAGATTGCGGGTAATGCAGCGGTTAGAACTGTGGGGACCACGGCTGTTGTGGCGGTTATGGCTACGAGGGAGATTGTTGTTGCAAATTGTGGTGATTCTAGGGCGGTTATGGGAAGAGGCGGCGAAGCTGTGGAGTTGTCTAGTGATCATAAGCCAGAGAGACCTGATGAGTTGATGCGAATAGAAGAAGCTGGTGGAAGAGTCATAAACTGGAACGGCCACCGTGTTCTTGGTGTTCTTGCCACTTCACGATCTATAGGAGATGAGTATCTTCGACCATATGTGATATCAAAACCTGAAGTCACTGTAACAAAGCGAAGCAGTGATGATGAATTTCTGATACTAGCAAGTGATGGTTTATGGGGTGTGATGTCTAGTGAAATTGCGTGCCAAGTTGTAAGGAAATGCTTGAAAGGGAAAATAAGGAGAGTTTGTGATGGGGTTGGGAATCAGACGAGTCGTGCTGCTGAAGCTGCAGCATTATTGTCTGAGATAGCATTGGCAAAGGGTAGCAGGGACAATACCAGTGTCATAGTAGTTGACCTAAGAGGAACATTAACATCTAGTTGA 1104 0.4737 MKDVKRHSLESSFSRVEAVKKLENVQRRRLKIRRMKYSCQAKIHVGDDSAGGEEKEFHESVQISLSLASSSPSSSSEEEDRSSKRNDEDEDVSYGSVSVIGCRKEMEDAVSVEIGFAVKENQKCDFFAVYDGHGGAQVAEVCRERLHQVVAEEVERCVNDVEWNWERVMEGCFGKMDREIAGNAAVRTVGTTAVVAVMATREIVVANCGDSRAVMGRGGEAVELSSDHKPERPDELMRIEEAGGRVINWNGHRVLGVLATSRSIGDEYLRPYVISKPEVTVTKRSSDDEFLILASDGLWGVMSSEIACQVVRKCLKGKIRRVCDGVGNQTSRAAEAAALLSEIALAKGSRDNTSVIVVDLRGTLTSS* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0899 367 SMART PP2C_SIG_2 109 360 IPR001932 -
Psa6g0899 367 Gene3D - 84 363 IPR036457 -
Psa6g0899 367 ProSiteProfiles PPM-type phosphatase domain profile. 93 360 IPR001932 -
Psa6g0899 367 ProSitePatterns PPM-type phosphatase domain signature. 126 134 IPR000222 GO:0043169
Psa6g0899 367 PANTHER PROTEIN PHOSPHATASE 2C 51-RELATED 56 363 - -
Psa6g0899 367 MobiDBLite consensus disorder prediction 77 92 - -
Psa6g0899 367 SUPERFAMILY PP2C-like 92 361 IPR036457 -
Psa6g0899 367 PANTHER ALPHABET, ISOFORM E-RELATED 56 363 - -
Psa6g0899 367 MobiDBLite consensus disorder prediction 65 92 - -
Psa6g0899 367 Pfam Protein phosphatase 2C 94 353 IPR001932 -
Psa6g0899 367 SMART PP2C_4 83 358 IPR001932 -
Psa6g0899 367 CDD PP2Cc 92 360 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0899 Psa-Chr6 33520390 33522665 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0899 54 361 PP2C-type Phosphatase Gene Family AT2G29380 49.240 1.32e-90 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0899 K14497 - gmx:100807235 455.292