Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0898 ATGTGGAGCAATTACTCTACACTTGTTCTTCCATTCTTTTGCTTCTTTTTGAGTGCAAATTACTACACTAACCTTGCTTCAGCCAATACTCAATGCATGAAAACAAGGTGTAATCACAAAGATGCTCCTATAATTCAATACCCTTTTAGAAACATTCAACCACAAAATTGTGGCAAAACTGGATTTGATCTTTCATGCAATGAGAATCACCAAACCATACTAAAATTGCCAAGTTCAATCAATTTTATTGTCAACAAAATTGATTACAAGTCCCAAAATATTCATGTGACTGACCCAAATGGATGTCTTCCAAAACTCCTTTCAAAATTCAATGTATCATCCACTCCTTTTCATTTCATTGACAAATCCAATTCAAATTCAAATTCCAATTATACCCTCTTCAATTGTTCATCCATGAACACTGCTTTACAATCTTATTACCCTTCCATTAAATGTCTTTCTTCTCATGGATACCAAGTTTATGCATTGGACTCCACACTTCAAATTAAGGATGTTACTTTGACATATTGTACCAAGTTGTATGACATGTCTTTTGTTCCAAACGATGTTGTTTTAAACCATGGTGATGATCTTGTTTTAGGATGGGATACAAGTTGTAGCAATCAAAGTGAAGCAAAACATGAATGTTACAAAAATGTCAACAAATCTAAAGGAGCAGGGAGAAAAATGGAGATTCTAGTACCGGTACTATCATGTCTTGGAATTTTACTACTAGTCACAGCGTTATATCATGTTCGATACACAACTCAAAAAGACAAAGAAAATGAAGCAAGAATAGAAAAGTTCTTAGAAGATTATAGAGCATTGAAGCCTACAAGGTATAGCTATTCAGACATAAAAAGGATCACAAACAATTTCAAGAACGAACTTGGACAAGGAGCATACGGAACGGTGTACAAAGGTAAACTATCGAGCGACATATATGTCGCGGTCAAGCTTCTCAAAACATCAACAGGAAATGGACCTGAGTTCATCAATGAAGTAGGAACAATGAGTCAAATTCATCATGTTAATGTTGTTCACTTAGTAGGCTTCTGTGCGGACGGACACAAGCGAGCACTTGTTTACGAGTATTTACCGAATGGTTCATTGCAGAAGTATATTTCCACGACCGATTTCAAAAACCATTTTTTGAGTTGGGAGAAGTTACAAGAAATCGCGCTTGGAATAGCGAAAGGAATCGAGTATCTTCACCAAGGGTGTGACCAAAGGATACTTCATTTTGACATAAAGCCGCATAATATCTTACTTGACAATAACTTCACTCCTAAGATATCTGATTTTGGTTTGGCTAAGCTTTGTTCAAAGGATCAGAGTGCGGTCTCCATGACCGCGGCTAGGGGGACTATTGGTTACATAGCACCAGAAGTTTTTTCTAGAAACTTCGGGAATGTGTCGTATAAGTCTGATGTATATAGTTTTGGAATGTTATTGCTTGAGATGGTCGGGGGAAGACAAAATGCCGATGTTGTAGACAAGAGAAGTGGTTTAGGGTATTTTCCGGAATGGATTTATAATTTACTAGAGCAAGGGAATGATTTGAGCGAACATATTGAGGTGGAGAAATACGCGAAAATAGCAAAGAAACTTGCGATTGCGGGACTTTGGTGTATTCAGTGGCATCCGGTCGATCGTCCTTCAATGCAAGATGTTGTTCATATGTTGGAAGGAGATGGAGGTAAGTTAAGTATGCCACCTAATCCATTTGCTTCTGCTGATCCTGCTATAATGAATGTGAGTTTAATTGGAAGGCACTTTCATAGAGAGTGA 1791 0.3735 MWSNYSTLVLPFFCFFLSANYYTNLASANTQCMKTRCNHKDAPIIQYPFRNIQPQNCGKTGFDLSCNENHQTILKLPSSINFIVNKIDYKSQNIHVTDPNGCLPKLLSKFNVSSTPFHFIDKSNSNSNSNYTLFNCSSMNTALQSYYPSIKCLSSHGYQVYALDSTLQIKDVTLTYCTKLYDMSFVPNDVVLNHGDDLVLGWDTSCSNQSEAKHECYKNVNKSKGAGRKMEILVPVLSCLGILLLVTALYHVRYTTQKDKENEARIEKFLEDYRALKPTRYSYSDIKRITNNFKNELGQGAYGTVYKGKLSSDIYVAVKLLKTSTGNGPEFINEVGTMSQIHHVNVVHLVGFCADGHKRALVYEYLPNGSLQKYISTTDFKNHFLSWEKLQEIALGIAKGIEYLHQGCDQRILHFDIKPHNILLDNNFTPKISDFGLAKLCSKDQSAVSMTAARGTIGYIAPEVFSRNFGNVSYKSDVYSFGMLLLEMVGGRQNADVVDKRSGLGYFPEWIYNLLEQGNDLSEHIEVEKYAKIAKKLAIAGLWCIQWHPVDRPSMQDVVHMLEGDGGKLSMPPNPFASADPAIMNVSLIGRHFHRE* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0898 596 PANTHER RUST RESISTANCE KINASE LR10-RELATED 24 589 IPR045874 GO:0004672
Psa6g0898 596 ProSiteProfiles Protein kinase domain profile. 291 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0898 596 SUPERFAMILY Protein kinase-like (PK-like) 274 563 IPR011009 -
Psa6g0898 596 ProSitePatterns Protein kinases ATP-binding region signature. 297 319 IPR017441 GO:0005524
Psa6g0898 596 Pfam Protein tyrosine and serine/threonine kinase 293 562 IPR001245 GO:0004672|GO:0006468
Psa6g0898 596 PANTHER RECEPTOR-LIKE KINASE 24 589 - -
Psa6g0898 596 SMART serkin_6 291 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0898 596 Gene3D Phosphorylase Kinase; domain 1 264 365 - -
Psa6g0898 596 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Psa6g0898 596 Gene3D Transferase(Phosphotransferase) domain 1 366 568 - -
Psa6g0898 596 Pfam Wall-associated receptor kinase galacturonan-binding 32 98 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0898 Psa-Chr6 33489479 33492456 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0898 47 582 Receptor kinase-like Gene Family AT1G66910 37.416 3.67e-113 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Psa6g0898 PK_Tyr_Ser-Thr 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0898 - - zju:107414589 654.44