Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0897 ATGTCTTGGAAAATGCTTGTGAACCTAACTGTTATAATCCTCCTCCTATGGCTATACCCTCTTCCTTGCCTAACACAAACAAATCACCAATGTCTCGTTTCATCTTGCGGCGATATACGAAACATTACCTACCCTTTTCGTCTAAAAGGCGAACCCGAAAACTGTGGTGATCCAAACTATGAACTTTCATGCGAGAACAATCAAACAATACTTAATCTAGACAGTGGAAAATACTTTGTAGAAGCCATCAACTACAATAACTCCACAATAAGGATAACAGATTCAGGTGTCAACAAACACAACTGCTCTTCCATTCCTCTCTACACTTTAACAAATGAAAGTTTCACCACCGAAAAACCTTATAGCTTGTTGAATAATAATAAGAACTTAGTAACCGTAGCGTTTATAAGCTGCGCAGCCTCGGTTACTTCTCCTATTTACATGGATACTTCATCTTGTATGAAAGGATCGAGCAACTCTTCCAACTATGCTGTATTTGGTGACATGAAAATCTCTGAGCTGGAAGATTCATGCCGCATACTTGTTATGGTTATGATTTCAAATTTGAACAAAGGTGATAATAACAACGTTTCGTATGTGAAAATCCATCAGCAACTTGTTTATGGTTTGGAGCTTTCTTGGAGTGAGATATTCTGCAAAGAATGCCAAGGTAGGGGTTCCTGTAAATTGAACAACAAAAATGAGGTCATTGGTTGTTCACGAGGTCGACCATGTAGTCGTGACGATATATCTTCTTTTAAATGTGCTTTAAAAGTGGTAATCCATGCAGCCAAAGATGTGACGGAAGGTCCTCACAAATTAGGCGGAATAATCGGAATAGTAATTCTTGTAAGAATCATAGGAGGATTATTGTTTATCCCAATGTACATGATATATAAATGGAGAAGGAGGCATTTATCTGCGTATGATTCAGTCGAAGAATTTCTCAAAACTCACAACAATCTCATGCCAATACGATACTCTTACTCCGACATTAAAAAAATGACAAAAGGATTCAAGGATAAACTCGGTGAAGGCGGCTATGGTTCTGTTTACAAAGGACAACTTCGCAACGGTCACCTCGTGGCAATCAAGATGTTAGGAGGAAAATCGAGAGCTAATGGACAGGAATTCATCAATGAAGTTGCTACCATTGGAACAATCCACCATGTTAATGTAGTTCACCTAATTGGCTTTTGTGTTGAGAAATCAAAAAGAGCACTTGTTTACGAGTTCATGCCGAATGGTTCTCTTGAAAAACACATTTTCTCAAGAGAAAGACTGAGTTCTTTGAGTTGTGAGAAAATGTTTGATATAGCGCTTGGTGTAGCGCGCGGTATTGAATATCTGCATAGAGGTTGTGACATGAGGATTTTGCATTTTGATATAAAGCCTCATAACATTCTTCTTGACGTGAACTTTACTCCAAAGGTTTCGGATTTTGGACTAGCAAAGTTATATCCTATTGACAATAGCATTGTGTCGCTTACGGCTGCAAGAGGAACCATGGGATACATGGCGCCCGAGTTGTTCTATAAGAACATTGGAGGAGTATCATATAAAGCAGATGTCTATAGCTTTGGAATGTTGTTAATGGAAATGGTGAGTAGGAGAAGGAACATGAACGAGAACGAAGATCGTAAGAGCCAGGTTTATTTCCCTTCTTGGGTTTATGATCAATTTAGTGAAGGGAATGAAATAGAAATGGGAAATGGTACGGAAGAGGAGGAGAGGATGTCGAAGAAGATGATAATAGTTGCGCTATGGTGTATACAAATGAAACCAAGTGATCGTCCTTCGATGAACAAAGTAGTCGAGTTGCTTGAAGGAGATGTTGAGGCCTTAGAAATGCCTCCTAAGCCATTTCAAACTCCGAAAGGAATGTCTGGACAAGGTATTGGCCAATTCAGAAATCTACCTTGGTTGCTACCAGGGGAATCTACAAATTCACTTACCATTGTTATAAATAGACGTTAA 1977 0.3895 MSWKMLVNLTVIILLLWLYPLPCLTQTNHQCLVSSCGDIRNITYPFRLKGEPENCGDPNYELSCENNQTILNLDSGKYFVEAINYNNSTIRITDSGVNKHNCSSIPLYTLTNESFTTEKPYSLLNNNKNLVTVAFISCAASVTSPIYMDTSSCMKGSSNSSNYAVFGDMKISELEDSCRILVMVMISNLNKGDNNNVSYVKIHQQLVYGLELSWSEIFCKECQGRGSCKLNNKNEVIGCSRGRPCSRDDISSFKCALKVVIHAAKDVTEGPHKLGGIIGIVILVRIIGGLLFIPMYMIYKWRRRHLSAYDSVEEFLKTHNNLMPIRYSYSDIKKMTKGFKDKLGEGGYGSVYKGQLRNGHLVAIKMLGGKSRANGQEFINEVATIGTIHHVNVVHLIGFCVEKSKRALVYEFMPNGSLEKHIFSRERLSSLSCEKMFDIALGVARGIEYLHRGCDMRILHFDIKPHNILLDVNFTPKVSDFGLAKLYPIDNSIVSLTAARGTMGYMAPELFYKNIGGVSYKADVYSFGMLLMEMVSRRRNMNENEDRKSQVYFPSWVYDQFSEGNEIEMGNGTEEEERMSKKMIIVALWCIQMKPSDRPSMNKVVELLEGDVEALEMPPKPFQTPKGMSGQGIGQFRNLPWLLPGESTNSLTIVINRR* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0897 658 PANTHER RUST RESISTANCE KINASE LR10-RELATED 7 260 IPR045874 GO:0004672
Psa6g0897 658 PANTHER RUST RESISTANCE KINASE LR10-RELATED 277 629 IPR045874 GO:0004672
Psa6g0897 658 Pfam Wall-associated receptor kinase galacturonan-binding 31 94 IPR025287 GO:0030247
Psa6g0897 658 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Psa6g0897 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Psa6g0897 658 Gene3D Transferase(Phosphotransferase) domain 1 413 623 - -
Psa6g0897 658 ProSiteProfiles Protein kinase domain profile. 337 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0897 658 Pfam Protein kinase domain 340 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0897 658 Gene3D Phosphorylase Kinase; domain 1 311 412 - -
Psa6g0897 658 CDD STKc_IRAK 343 610 - -
Psa6g0897 658 SMART serkin_6 337 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0897 658 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 7 260 - -
Psa6g0897 658 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 277 629 - -
Psa6g0897 658 SUPERFAMILY Protein kinase-like (PK-like) 318 608 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0897 Psa-Chr6 33485231 33488307 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0897 12 621 Receptor kinase-like Gene Family AT1G66910 34.938 3.74e-110 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Psa6g0897 Pkinase 2.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0897 - - hbr:110665770 687.567