Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0881 ATGATGGGCTTGATACTTTTCTTAATGTTGTTGATCTATACATATAGAAGAAGACATTCATCAATATATGAAAATATTGAAGATTTTCTACAAGGTAATACTCTCATGCCAATAAGATATTCATATAAAGAGATAAAGCAAATGACAAAAAATTTCAAGATAAAATTGGGTGAAGGAGGTTATGGAGATGTGTACAGGGGTAAGCTTATAAGCGGGCCATTTGTAGCCATAAAGATGTTGAAGATAAAATCAAATGCAAATGGACAAGATTTCATTAGTGAAGTTGCAACTATAGGAAGAATATACCATTCAAATGTGGTAAGACTTATTGGATTTTGTGTTGAAGGATTAAAACGTGCTCTTGTCTATGAGTACATGCCCAATGGCTCTCTTGATAAATATATTTTCAACAAAGAGGAACTTATATCTTTAACTTACAATCAAATACATGAGATATCTCTTGGAATAGCCCGTGGAATTTCTTATCTACATCAAGGTTGTGATATGCAAATCTTACATTTCGATATTAAGCCTCATAATATCCTTCTTGATGAAAATTTCAACCCAAAAGTTTCAGATTTTGGTCTTGCAAAGCTTTATCCTATTGACAATAGTATTGTCACTTTGACAGCCGCAAGAGGAACAATTGGATACATGGCTCCTGAATTGTTCTACCAAAATATTGGAAGAATATCTCATAAAGCAGACGTGTATAGCTTTGGAATGCTTTTGATTGAGATGGCTAGTAGGAGAAGAAATTTGAACCCGCACGCTGAACATTCAAGTCAACTCTATTTCCCCTTTTGGATTTACGAGCAATTGGTTAAAAATAGGGAGAAAGAAATAGAAGATTTTATCATGGAAGAATTTAATGATGTCTTGAAAAAAATGTTCATGGTTGCTCTTTGGTGTATACAGTTGAAACCCGTTGATCGTCCTTCGATGAGCAAAGTAGTGGAGATGCTTGAAGGAGATATTGCAAATATTGAAATGCCTCCTAAGCCTATACTATATCCACGTGAAACAATTCAAGAGAATCTTGATAGTGAAACAGATATTGGCTCTACCAGTTATGTGGAGGAAATTGAAAGCAATTCTTTGTTAAAGTATTCTGCTTCATAA 1122 0.3387 MMGLILFLMLLIYTYRRRHSSIYENIEDFLQGNTLMPIRYSYKEIKQMTKNFKIKLGEGGYGDVYRGKLISGPFVAIKMLKIKSNANGQDFISEVATIGRIYHSNVVRLIGFCVEGLKRALVYEYMPNGSLDKYIFNKEELISLTYNQIHEISLGIARGISYLHQGCDMQILHFDIKPHNILLDENFNPKVSDFGLAKLYPIDNSIVTLTAARGTIGYMAPELFYQNIGRISHKADVYSFGMLLIEMASRRRNLNPHAEHSSQLYFPFWIYEQLVKNREKEIEDFIMEEFNDVLKKMFMVALWCIQLKPVDRPSMSKVVEMLEGDIANIEMPPKPILYPRETIQENLDSETDIGSTSYVEEIESNSLLKYSAS* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0881 373 SUPERFAMILY Protein kinase-like (PK-like) 35 323 IPR011009 -
Psa6g0881 373 Pfam Protein kinase domain 54 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0881 373 Gene3D Phosphorylase Kinase; domain 1 26 125 - -
Psa6g0881 373 ProSiteProfiles Protein kinase domain profile. 50 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0881 373 SMART serkin_6 50 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0881 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Psa6g0881 373 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 1 353 - -
Psa6g0881 373 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 353 IPR045874 GO:0004672
Psa6g0881 373 Gene3D Transferase(Phosphotransferase) domain 1 126 331 - -
Psa6g0881 373 ProSitePatterns Protein kinases ATP-binding region signature. 56 78 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0881 Psa-Chr6 32347356 32359336 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0881 1 360 Receptor kinase-like Gene Family AT1G66910 46.505 2.39e-110 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Psa6g0881 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0881 - - cam:101508554 631.328