Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0859 ATGTCAGTCACAATAATCCTAGCACTGCTACTTCTGCAGATAATGAACTTTGTAAATTGTCTGAATAATAACTACTCCTCCATTAGATGCCCCTTTCGTCTATCTTGTTCTAATAACAAGCAGCAAATCCTTGAATTTCCCTCACTACCAGTATCTGAAAAATTCATTGTCGAAGACATAGATTGCAAAAGGAAACGTATAGTCCTATCTGACTCACACAACTGTTTTTCTAGTCTCTTTCTAAGACACAACGTATCACTATTTTATCCATTCCATTTTCAACCAGGTTTTCGCTTTAGCAGCAACAATGTCACTTTCTTTAACTGTTCTTCAGTTCGACAACACCGTCTCAAAAGCTGGGACGATACAAACCCCGGCGCCCAAGACATGTTGTCTTGTCCGATATATGTAGCCGATCCGACCGAAAGTATCGTTGATCTAGACTTATTAAGCTGCACAAGAATATTTGATAAAGTTTTGCCAATAGACGCATTTTATATAAGGTTAAACAATCTTGAATTGAATTGGACTGAAACAAATTTTGACAGTCGATGTTTAGAGTACGAGTTACACAACAAGTCAAAGAACCACACATCTATTATTTTAGAAACAACAGGAGCAATTGTTGGTTCAACTATGCTGGTTTTTTTTATTGGTGTTTTCTTTCGAGTATACTTGTATTTTCGGATGAAAAGTGAAGATCAAACTAGACTTGAAAACTTTTTGAAGGATTACGAAGCTTCAAAGCCTACACGATTCTCTTACGCCGATATCAAGAGAATTACAGATCAATTCAACGAAAAACTAGGCGAAGGAGCTCATGGAGCTGTCTATAAAGGCAAACTATCGAGCCAAATTATGGTTGCTGTGAAGATGCTTAACAATACAGAAGGAGATGGGAGAGAGTTCATTAATGAAGTGGGAACTATGGGAAAAATTCACCATGTTAATGTTGTTCGCTTGCTTGGCTTCTGCGCGGATGGATTTTATCGAGCTTTGGTTTACGACTTTTTCCCGAATGGTTCACTACAAAAATTCATATCTCCGCCCAACAACAAGGATGCTTTCCTTGGTTGGGACTTATTGCAACATGTTGCTATAGGCATTGCCAATGGGATTGAGTATCTTCACCAGGGTTGTGATCATAGAATTCTTCACTTTGATATCAATCCACATAATGTGCTGTTAGATGACAATTTCGTTCCAAAAATATCAGACTTCGGTTTAGCTAAGTTGTGTTCGAAAAATCAAAGTACGGTCTCGATGACTGCAGCGAGAGGAACGTTAGGGTACATGGCTCCTGAAGTTTTTTCTAGAAACTTTGGGAATGTCTCTTATAAGTCAGATATATACAGCTACGGTATGTTGCTGTTGGAGATGGTTGGAGGAAGAAAGAATACTAATGTGACCATAGGTGAAGAAAATTTCCAAGTTTTGTATCCAGATTGGATCCACGGTTTGCTCGAAGGGAGAGACATACATATCCCAATTGATGAAGATGGAGATTTTAGAATTGCAAAGAAACTTGCAGTTGTAGGACTTTGGTGCATTCAGTGGCACTCGGCGGATCGTCCGTCTATGAAAAACGTGCTGCAGATGCTACAAGGAGAGGGAGACAAGTTAAAAGTTCCAACGAATCCTTTCAATGCTTCGTCTTCTGCTAATAGAACTGCAAACACTGCTGCAGGATATTTGAAGTTAGAACTAGATGTGATTCAAGAGTTAGACTAG 1731 0.3888 MSVTIILALLLLQIMNFVNCLNNNYSSIRCPFRLSCSNNKQQILEFPSLPVSEKFIVEDIDCKRKRIVLSDSHNCFSSLFLRHNVSLFYPFHFQPGFRFSSNNVTFFNCSSVRQHRLKSWDDTNPGAQDMLSCPIYVADPTESIVDLDLLSCTRIFDKVLPIDAFYIRLNNLELNWTETNFDSRCLEYELHNKSKNHTSIILETTGAIVGSTMLVFFIGVFFRVYLYFRMKSEDQTRLENFLKDYEASKPTRFSYADIKRITDQFNEKLGEGAHGAVYKGKLSSQIMVAVKMLNNTEGDGREFINEVGTMGKIHHVNVVRLLGFCADGFYRALVYDFFPNGSLQKFISPPNNKDAFLGWDLLQHVAIGIANGIEYLHQGCDHRILHFDINPHNVLLDDNFVPKISDFGLAKLCSKNQSTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNVTIGEENFQVLYPDWIHGLLEGRDIHIPIDEDGDFRIAKKLAVVGLWCIQWHSADRPSMKNVLQMLQGEGDKLKVPTNPFNASSSANRTANTAAGYLKLELDVIQELD* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0859 576 ProSitePatterns Protein kinases ATP-binding region signature. 269 291 IPR017441 GO:0005524
Psa6g0859 576 SUPERFAMILY Protein kinase-like (PK-like) 244 534 IPR011009 -
Psa6g0859 576 Gene3D Phosphorylase Kinase; domain 1 236 337 - -
Psa6g0859 576 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 19 575 - -
Psa6g0859 576 PANTHER RUST RESISTANCE KINASE LR10-RELATED 19 575 IPR045874 GO:0004672
Psa6g0859 576 ProSiteProfiles Protein kinase domain profile. 263 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0859 576 Gene3D Transferase(Phosphotransferase) domain 1 338 550 - -
Psa6g0859 576 Pfam Protein tyrosine and serine/threonine kinase 265 467 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0859 Psa-Chr6 30296019 30297993 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0859 229 547 Receptor kinase-like Gene Family AT1G66910 48.308 4.73e-101 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Psa6g0859 PK_Tyr_Ser-Thr 2.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0859 - - adu:110273083 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0859 6 30296019 30297993 Psa6g0859 6 30296019 30297993 ECH