Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0814 ATGGACGTAGGTGGTGATGAAGAGTTCAGGAGGTGTAATAGTAATGGGTCTGGAAACCCCCAATGTGAACCTGAGAGAAAGAAAAACAGGAAGGAAAGTACTTCTGGGAGAAAAAGAAAAGCTGAAGAAAATTCACAAAATGGGGTTGTTGATGACGATGGAGGTAAAGGGTTGTTTGATGGCGGTAGTGGGATTTTTGCTGAAGGTGAAGTGAATGGCGGTGTTGATCTTGGTATTGGTTCTGGAAATTTTAATCTCTGGCAACAAGGAGGAGAGGGTCAGCAGCTTGTTTTTGGAGAGGGAAGTGGAAATTTAGGTAAGTTTCTTGGGGATGGAGTTGATTTTTTGGGTGGGTTTGTGGAGGATAGGAACGGTGTTGGTTTAGGTCAGCCATGGAGTAGTGTAGGTGTATTTGGAAATGCTGCTGGGGTTTCTGGTGTTGCTAAAGAAGATCATGGAAAATGCGTTGATGGTGTTTGTGGAAATGACTCACTTGGTTTTCATTCTCAAGGAATTGAAGGGTTGATTGGGGAAGAAGAAGCTGGTTTTGGGAATTTATATGATAGGAGTTTTCAAGCACTTCTTTGTCAAGGTAAGGTTTGTGATGAAGATGTGAATTTAATTGGTGGTGGAACAGGCTTTCAAGGGTTGGTTGGTGAAAGTGCTTATGATTTTAGAGGTGAGGTTGGTGAGGGTGTGGGAAATTTAAATGAGAGTGGCGGTAAATTCGGAGGTGAAAAAATTGTTGGTAATGTATTAGAGGCTCCTAATTCAAGTAACAAGGTGAAAGCCATTGGTGTTGAAGAGGGAATAGAACTGTTACCCAGTGGAGGAGTTTCTACTCCTAATGAAGAGGCAAGAGGTGAAGTTTTGAAGCCATTGACAAGGAGAGGAGGAAGGCCCAAGGGTTCTAAGAATAAGAAGAAAGGGGTTAGCTTAGCTTTGGAAGGAAAAGCGGATTGTGGAAGTGATAATGCAGGAGCAATTGGGATGGGCACGGTTGAAGTTTTAGAGAATGAAAAATCAGTGTTTTCTGGTAAGTATGATGGGGAAGGTGTGGACATGGGTGAGATTGCTAGGACAAGGGAGTGTAGTCAACTAGAAGATTTGAAGTATACAGGGGAGATTGTTTTTGCGGCCGGTTATGAAGTTGCCGGGGTTAGTGAGATTTCAAGACCATGCAAGCTTGCTCCAGAGTCAAAGGGTCCGGTAAACAAAGAGAAGAATGTTGAGGAGGTTAGTACTAGCAGTGAAGTTGCTGTTGAGATAGCAAGGCCTAAGAAGCGTGGTCGGCGAAAGGGTTCAACAAATAAAATGGTAACCTATAGTGCTTGTAGCAAAGAAGGAGCTGATGACATTGAAACACAAGGTTCGGAAGAAAAAATGCTGATCGTTCCGTATCAGAAAGGTGCAGATGGGTTTGCAAGCCCAACTAATAAACTTGGTCCAGCATCGTCTACAAGGAATAAATTGAGAAGTATTGAATTTGAGGGTTATAAGAATCCAGAAATGTCTAGTAATGTTCGTCTTGAAGATGATGGAACTCCAAGTGGTTTGGAGATTACTACACTGGCTCCTTTATGTGAGATGGAAAAAGGGATGCCTTTTGAATCTGCCAAACATATTGAAAACTTAACTACGCCGCCGATAATTAAGCGTGGTCGGCCTAAGGGCTCAAAGAACAAGAAGAAAGAGCTAGCCGATCAGGAGCACATAGGCCATGAAGGTGACATCATTAAGCTAATTGGTGTGGAAAATTACGAAGCCACTGCTGTTAGTGTCGGGGATCAGGAATTGGTGGTCCAAACCCTTGGTCAAGATGAGGTTCAGAATGTTAAACCAAAGATCGGTAGACCAAAGGGATCTAAAAATAAGAAGAAAAATATTGACGGTGAAGCTGAAAACAAGTTACATGAGAAAAAAAAACGTGGTAGGCCTAAGGGTTCCGGCAAAAAGCAAAAGGAGAACGCTTCTCGATTGGATGCAGAGATTGAATGTGAGAATAATACACGTGTCTATGGGATTTTGAGTACGACTATACAACATAAACACATACATGAGGAATCCGTTTTACTGCTAGAAGATCAAGTATATAAGAAAGACGATGCAGATTTTGTTCCTGAGTGCTCAAAGGAGTCTGGAATTGAAAAGATAGCAAAGGGATTGGTGAGTGAATCCGACAATCTCCATAAGACTCAGGATGTCGAAGTGGGAGATATTTTTTATGAAAAGGAAGTGAAAGAAACTAGAGACCATGGATTGGAATCTGACAATGTCCATAAGACTCAGGATGTCGAAATGGGAGATATTTTTTATGAAAAGGAAGTGAAAGAAACTAGAGACCATGGATTGGAATCTTCAGATATGATGGGTGACTGTGAGGCCAAAAAGGAGCCAAGGAATTCAAGGTGCCATCAATGCTGGAAGAAGAGTAGAACTGGTCTTGTTGTTTGTTCCAAGTGCAAAAGAAAGAAATATTGCTACGAGTGCATAGCAAAATGGTACCAAGATAAAACTAGAGAGGAGATAGAGACTGCTTGTCCCTTTTGTCTGGATTATTGCAATTGCCGAATGTGCCTGAAGAAAGCTATATCTACAATGAATGGAAATGATGAAGCAGATAGAGATGTCAAATTACGGAAACTGCTTTACTTGCTTAACAAAACTTTGCCATTACTCCAAGATATCCAACGAGAGCAGAGATATGAATTGGAAGTAGAAGCAAGCATGCACGGTTCACAGTTGGTGGAAGAGGAGGATATTCGGAAGGCAGAAGTTGACGACGATGATCGAGTTTATTGTGACAACTGCAATACATCCATTGTCAATTTCCACAGAAGTTGTTCCAATCCTAATTGTCAGTATGATCTCTGTCTTACTTGTTGCACTGAACTAAGAATTGGAGTTCATTGTAAAGATATTCCTGCTAGTGGTAATGAGGAAATGGTCGACGCGCCACCTGAATCCATTCCTTGGAGAGCAGAGACAAATGGTAGTATTCCCTGCCCTCCGAAAGCTAGAGGAGGTTGCGGTATTGCTACCCTCTCACTGAGGCGCCTATTCGAAGCTAATTGGATTGACAAGTTGACTAGAGGCGTGGAGGAACTTACCGTAAAATATCAGCCACCTATTGCTGATCTTTCTCTAGGATGTTCAGAGTGCCGTAGTTTTGAGGAAGACGTAGCACAAAATTCTGCAAGGAAGGCAGCTTCAAGAGAAACCGGTTATGACAACTTTTTGTACTGTCCGGATGCTGTTGAAATCGGAGAAACAACATTTCAGCATTTCCAAAGACACTGGATAAGGGGTGAACCTGTTATTGTTAGGAATGTGTATAAAAAGGCCAGTGGTCTTAGCTGGGACCCAATGGTGATGTGGAGAGCTTTTATGGGGGCAAGAAAAATATTAAAAGAGGATGCCGTTAATTTTAAAGCCATTGATTGCTTGGATTGGTGCGAGGTAGAAATTAACGCCTTTCAGTTCTTCAAAGGCTACTTGGAAGGTCGTAGATACAGAAATGGATGGCCAGCTATGCTGAAGCTAAAGGATTGGCCTCCATCAAATTTTTTTGAAGAGTGTTTGCCAAGGCATGGTGCTGAGTTTATAGCAATGCTTCCTTTTAGTGATTATACACATCCCAAATCCGGTATTTTAAACCTGGCCACAAAGCTCCCTGCTGTTTTGAAGCCTGATTTGGGTCCTAAAACATACATTGCTTATGGAACTTCAGACGAGTTGAGTAGAGGTGATTCTGTGACAAAATTACACTGTGACATTTCAGATGCGGTCAATATTCTGACACATACTGCTGAGGTAAAGCCACCACCATGGCAATCCAGAATCATAAAAAAGTTACAAAAGAAGTATGAAGTTGAAGATATGCGTGAGCTCTACAGTCATGACAAAACGGCAGTTGGTTTACCTAGAAAAAGAGGCAGAAAGCGTCGCGTAGGTTTTAGCGTGGATCCTAAAATTTCTGAAAAAGAAGACACTAATGGTAGAGACTCAACCTTACAAGGAAGTCAAGGAAAAGAAGAGAAATTAGATGAACAAGAATCCTCAGAACCCACCAAAATAAAATTCGATTTAAATGCCAGCGAGCAGGAAATCTCCAATTCACCAAGGTTTCAGCAATTTGACCTCAATAGTCATGACTCCAGTTTCTTGGTTCCTGGAAACGATTGTGAGTCAATGCATTATGATAACGTGCAACAAAGGTGCTCATCTCAAGGTGATGAATCTTATAAAGGAATTTCATCAGTGATTGATGATCAACCTTGTAGTGGAACAAAAGAAACAAAAATTGTCAACAAATTAAATTCTTCAGACGACTTCTGTTCAGATGTCGAGACTAACAATATAGATTCAGTCGAAAAGGATAGTTTGAGTAATAGTTTATGTCAAGATGATGTTCATTTGGGGACTCAAAATGGGAGTGCTGTATGGGACATATTCCGCAGGCATGATGTTCCCAAGCTAACAGAATATCTAAAGAAACACCATAGAGAGTTTCGCCACATAATTAATCTTCCGGTGAATTCTGTGATTCATCCCATTCATGACCAGATCCTTTATTTAAATGAGAAGCATAAAAAGCAACTAAAGCTAGAATATGGTGTTGAACCGTGGACGTTCGAGCAACATCTTGGGGAGGCTGTTTTCATACCTGCAGGATGCCCACATCAAGTGAGAAATAGAAAGTCTTGCATAAAAGTGGCTATGGATTTCGTTTCGCCTGAGAATGTTCAAGAATGTGTTCAATTGACAGAAGAATTTCGATTACTTCCTAAAAACCATAGATCTAAGGAAGATAAATTGGAGATAAAGAAGATGGCACTTTATGCCGCCGATGTTGCTGTCGCTGAAGCCAATGAACTCATGGGAGCTAAATGA 4893 0.4124 MDVGGDEEFRRCNSNGSGNPQCEPERKKNRKESTSGRKRKAEENSQNGVVDDDGGKGLFDGGSGIFAEGEVNGGVDLGIGSGNFNLWQQGGEGQQLVFGEGSGNLGKFLGDGVDFLGGFVEDRNGVGLGQPWSSVGVFGNAAGVSGVAKEDHGKCVDGVCGNDSLGFHSQGIEGLIGEEEAGFGNLYDRSFQALLCQGKVCDEDVNLIGGGTGFQGLVGESAYDFRGEVGEGVGNLNESGGKFGGEKIVGNVLEAPNSSNKVKAIGVEEGIELLPSGGVSTPNEEARGEVLKPLTRRGGRPKGSKNKKKGVSLALEGKADCGSDNAGAIGMGTVEVLENEKSVFSGKYDGEGVDMGEIARTRECSQLEDLKYTGEIVFAAGYEVAGVSEISRPCKLAPESKGPVNKEKNVEEVSTSSEVAVEIARPKKRGRRKGSTNKMVTYSACSKEGADDIETQGSEEKMLIVPYQKGADGFASPTNKLGPASSTRNKLRSIEFEGYKNPEMSSNVRLEDDGTPSGLEITTLAPLCEMEKGMPFESAKHIENLTTPPIIKRGRPKGSKNKKKELADQEHIGHEGDIIKLIGVENYEATAVSVGDQELVVQTLGQDEVQNVKPKIGRPKGSKNKKKNIDGEAENKLHEKKKRGRPKGSGKKQKENASRLDAEIECENNTRVYGILSTTIQHKHIHEESVLLLEDQVYKKDDADFVPECSKESGIEKIAKGLVSESDNLHKTQDVEVGDIFYEKEVKETRDHGLESDNVHKTQDVEMGDIFYEKEVKETRDHGLESSDMMGDCEAKKEPRNSRCHQCWKKSRTGLVVCSKCKRKKYCYECIAKWYQDKTREEIETACPFCLDYCNCRMCLKKAISTMNGNDEADRDVKLRKLLYLLNKTLPLLQDIQREQRYELEVEASMHGSQLVEEEDIRKAEVDDDDRVYCDNCNTSIVNFHRSCSNPNCQYDLCLTCCTELRIGVHCKDIPASGNEEMVDAPPESIPWRAETNGSIPCPPKARGGCGIATLSLRRLFEANWIDKLTRGVEELTVKYQPPIADLSLGCSECRSFEEDVAQNSARKAASRETGYDNFLYCPDAVEIGETTFQHFQRHWIRGEPVIVRNVYKKASGLSWDPMVMWRAFMGARKILKEDAVNFKAIDCLDWCEVEINAFQFFKGYLEGRRYRNGWPAMLKLKDWPPSNFFEECLPRHGAEFIAMLPFSDYTHPKSGILNLATKLPAVLKPDLGPKTYIAYGTSDELSRGDSVTKLHCDISDAVNILTHTAEVKPPPWQSRIIKKLQKKYEVEDMRELYSHDKTAVGLPRKRGRKRRVGFSVDPKISEKEDTNGRDSTLQGSQGKEEKLDEQESSEPTKIKFDLNASEQEISNSPRFQQFDLNSHDSSFLVPGNDCESMHYDNVQQRCSSQGDESYKGISSVIDDQPCSGTKETKIVNKLNSSDDFCSDVETNNIDSVEKDSLSNSLCQDDVHLGTQNGSAVWDIFRRHDVPKLTEYLKKHHREFRHIINLPVNSVIHPIHDQILYLNEKHKKQLKLEYGVEPWTFEQHLGEAVFIPAGCPHQVRNRKSCIKVAMDFVSPENVQECVQLTEEFRLLPKNHRSKEDKLEIKKMALYAADVAVAEANELMGAK* 1631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0814 1630 MobiDBLite consensus disorder prediction 623 639 - -
Psa6g0814 1630 MobiDBLite consensus disorder prediction 550 570 - -
Psa6g0814 1630 MobiDBLite consensus disorder prediction 23 49 - -
Psa6g0814 1630 MobiDBLite consensus disorder prediction 1307 1357 - -
Psa6g0814 1630 ProSiteProfiles Zinc finger RING-type profile. 804 850 IPR001841 -
Psa6g0814 1630 MobiDBLite consensus disorder prediction 611 661 - -
Psa6g0814 1630 MobiDBLite consensus disorder prediction 1318 1357 - -
Psa6g0814 1630 CDD cupin_RmlC-like 1506 1565 - -
Psa6g0814 1630 PANTHER ENBP1 PROTEIN 986 1628 - -
Psa6g0814 1630 PANTHER ENBP1 PROTEIN 411 980 - -
Psa6g0814 1630 Pfam JmjC domain, hydroxylase 1461 1576 IPR003347 -
Psa6g0814 1630 SMART cupin_9 1194 1593 IPR003347 -
Psa6g0814 1630 ProSiteProfiles JmjC domain profile. 1213 1593 IPR003347 -
Psa6g0814 1630 MobiDBLite consensus disorder prediction 1 54 - -
Psa6g0814 1630 Gene3D Cupin 1427 1602 - -
Psa6g0814 1630 Gene3D Cupin 1084 1337 - -
Psa6g0814 1630 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 802 864 IPR018866 -
Psa6g0814 1630 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 986 1628 IPR045109 GO:0032454|GO:0033169
Psa6g0814 1630 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 411 980 IPR045109 GO:0032454|GO:0033169
Psa6g0814 1630 SUPERFAMILY Clavaminate synthase-like 1092 1624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0814 Psa-Chr6 28462025 28473683 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Psa6g0814 JmjC 1.9e-21 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0814 K15601 - lang:109335468 1214.13