Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0812 ATGATTGGTGCTTTGTTTTTAAATAAGATAGCTCTGAAGTTTGAACATAAAAGCAGTAAAGGGTGTAATTATGGACCTCCTTCTGAGTGGCAGGTTTACAATGTATTAGGTGGTAGTCATGGTGTCCCACGAGTTCATTACAAGGGACGGCAAGGTGATTTCTATATTATGGTCATGGATATTCTTGGCCCTAGCTTATGGGATGTATGGAATAACAAGACACACACGATGTCTGCTGAAATGGTGGCGTGTATAGCAATTGAGGCTATCTCCATATTAGAGAAGATGCATTCTAGAGGATACGTGCATGGTGATGTAAAACCAGAGAACTTTTTGCTCGGTTGTCCGGGAACTCATGAAGAGAAAAAGCTTTTTCTGGTTGATCTTGGATTAGCATCCCGTTGGCGTGATAATTCGACTGGTCTTCATGTTGAGTACGATCAACGTCCAGATGTATTTAGGGGAACGGTTCGTTATGCAAGTGTACATGCTCATCTTGGTAGGACAGGTAGCAGAAGGGATGATTTAGAATCTCTTGCTTACACACTAATTTTCCTTCTTCGTGGACGGCTACCTTGGCAAGGATACCAGGGAGAAAATAAAGGATTTCTTGTCTGCAAGAAGAAAATGGCCACCTCACCAGAAAATATGTGTATCCTTTGTCCTGCACCTTTTCGGCAGTTTATTGAGTACGTAGTGAATTTGAAGTTTGACGAAGAACCAAATTATGCAAAGTACATATCACTTTTCGATGGAATTGTTGGTCCAAATCCAGACATTAGACCCATAAACACCGATGGTGCACAAAAGCTTATATATCAGGTTGGACAGAAGAGAGGACGGTTGACCATGGAAGAAGATGATGATGAGCATCCAAAGAAAAAAGTTAGAGTGGGAATGCCAGCAACCCAATGGATTAGTGTGTACAGTGCACGCCGGCCTATGAAACAAAGGTACCATTACAATGTTACTGATATGCGGTTGTCCCAACACATTGAGAAGGGGTATGAAGATGGGTTGTTTATCAGCAGTGTAGGTTGCTGTTCTAACCTTTGGGCACTGATTATGGATGCCGGCACTGGTTTCACTGCACAAGTTTATGAACTCTCATCCTACTTTCTTCACAAGGAATGGATTATGGAACAGTGGGAAAAAAATTATTACATTAGCGCCATAGCAGGATCTAATAGTGGGAGCTCGTTCGTTGTAATGTCGAAAGGGACCCAGTACTTGCAGCAATCTTACAAGGTCAGTGAATCATTTCCATTCAAGTGGATTAATAAAAAATGGAAAGAAGGATTTTTTGTCACTGCTATGGCCACTTCTGGAAGTAGATGGGCAATTGTTATGTCTCGTGGTGCTGGATTCTCAGATCAGGTTGTGGAGCTTGATTTCTTGTATCCTAGTGAAGGCATTCATCGAAGATGGGACAACGGTTACCGCATCACCTCAACTGCTGCTACATATGACCAGGCTGCTTTTGTTCTTAGTATTCCAAGAAAAAAACTGGCTGATGAAACTCAAGAAACACTCCGTACATCTGACTTTCCTAGTACTCATGTCAAGGAAAAATGGTCAAAGAACCTCTATATTGCATCTATTTGTTATGGAAGAACAGTTTGA 1623 0.4159 MIGALFLNKIALKFEHKSSKGCNYGPPSEWQVYNVLGGSHGVPRVHYKGRQGDFYIMVMDILGPSLWDVWNNKTHTMSAEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGCPGTHEEKKLFLVDLGLASRWRDNSTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPENMCILCPAPFRQFIEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTDGAQKLIYQVGQKRGRLTMEEDDDEHPKKKVRVGMPATQWISVYSARRPMKQRYHYNVTDMRLSQHIEKGYEDGLFISSVGCCSNLWALIMDAGTGFTAQVYELSSYFLHKEWIMEQWEKNYYISAIAGSNSGSSFVVMSKGTQYLQQSYKVSESFPFKWINKKWKEGFFVTAMATSGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDNGYRITSTAATYDQAAFVLSIPRKKLADETQETLRTSDFPSTHVKEKWSKNLYIASICYGRTV* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0812 540 SMART serkin_6 8 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0812 540 PANTHER - 9 514 - -
Psa6g0812 540 Gene3D Transferase(Phosphotransferase) domain 1 7 297 - -
Psa6g0812 540 SUPERFAMILY Protein kinase-like (PK-like) 9 256 IPR011009 -
Psa6g0812 540 Pfam Protein kinase domain 11 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0812 540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 101 113 IPR008271 GO:0004672|GO:0006468
Psa6g0812 540 PANTHER CASEIN KINASE-RELATED 9 514 - -
Psa6g0812 540 ProSiteProfiles Protein kinase domain profile. 1 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0812 540 CDD STKc_CK1 8 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0812 Psa-Chr6 28410479 28416976 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0812 88 208 AGC Kinase Gene Family AT3G08720 27.273 7.44e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Psa6g0812 Pkinase 5.1e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0812 - - rcu:8275677 1016.14