Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0808 ATGGGAAACAACTGTGTTGGATCGAAAACCTCACAATCAAAGGATGTGTCATCACCCTCAGCTCTTCCAAGTCGTTCTTGCTGGTCGCGTGGTAGAAAGAAGAAAGATACTTCTGATGCATACAAAACCAGTCCAACAAAAGCTATAGAAACTGTTCAAAACAAGGCACCGCAGGTAGTGAAAATTGAGAATGAGGATGTAAAGCCAGCGCAACAGCAAAAACCGCAAACGAATGAAGGTGTTGTTGCTACACCTGCAAAACAAAAGAGGCCTCACAATGTGAAGAGACTAGCAAGTGCAGGACTTAAAGCAGATTCGGTTTTACAGCGAAAAACGGTTAGTCTTAAGGAGTTTTATAATTTGGGACAAAAACTTGGACAAGGGCAATTCGGAACAACATTTCTTTGTGTGGAGAAGGCAACTGGGAAAGAGTATGCGTGTAAGTCTATCTTGAAGAGGAAGTTGTTGACGGATGAGGATCTGGAAGATGTGAGGAGAGAGATTCAGATTATGCATCACTTGGCTGGGAGTGAAAACATAGTTTCGATTAAGGAAGCTTCTGAAGATGCTGTTGCTGTTCATGTTGTTATGGAGTTGTGTTCAGGTGGTGAGCTTTTTGATAGGATTGTGGAAAGAGGGCATTATACGGAGAGAAAAGCGGCTAAACTTGCACGGACTATTGTTGGTGTTATTCAGTCATGTCATTCTCTCGGAGTAATGCATCGTGATCTTAAGCCGGAGAATTTTCTTTTTGTTAATCAGCAAGAAGATTCTCCTCTTAAGGCAATAGATTTTGGACTATCTTCTTTTTTTAAACCAGGTGACATTTTCAATGATGTAGTAGGAAGTCCATACTATGTTGCACCTGAAGTTTTACGCAAGCGATATGGCCCAGAAGCAGATGTTTGGAGCGCCGGTGTCATCTTGTACATTCTCTTATGTGGGGTGCCTCCATTTTGGGGTGAATCGGAGCAGGAGATATTTGAGGCCATTTTGCATAGTGATCTTGATTTCACATCAGATCCATGGCCTGGTATATCTGAAAGTGCAAAAGACTTGGTTAAGAAGATGCTCGTTAGAGATCCTAGTAAACGGTTATCAGCTTTTGACGTTCTTCGTCACCCCTGGATTCAGGTTGATGGAGCAGCCCCAGACAAGCCTCTTGATTCTGGCAGTTTTGAGTCGATGAAACAGTTTACTGCAATGAACAAGCTCAAGAAAATGGCACTTAGAGTTATTGCCGAGAATCTCTCTGAAGAAGAAATTGCTGGATTGAAGAATTGTTTAAGATGA 1293 0.4207 MGNNCVGSKTSQSKDVSSPSALPSRSCWSRGRKKKDTSDAYKTSPTKAIETVQNKAPQVVKIENEDVKPAQQQKPQTNEGVVATPAKQKRPHNVKRLASAGLKADSVLQRKTVSLKEFYNLGQKLGQGQFGTTFLCVEKATGKEYACKSILKRKLLTDEDLEDVRREIQIMHHLAGSENIVSIKEASEDAVAVHVVMELCSGGELFDRIVERGHYTERKAAKLARTIVGVIQSCHSLGVMHRDLKPENFLFVNQQEDSPLKAIDFGLSSFFKPGDIFNDVVGSPYYVAPEVLRKRYGPEADVWSAGVILYILLCGVPPFWGESEQEIFEAILHSDLDFTSDPWPGISESAKDLVKKMLVRDPSKRLSAFDVLRHPWIQVDGAAPDKPLDSGSFESMKQFTAMNKLKKMALRVIAENLSEEEIAGLKNCLR* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0808 430 PANTHER CALCIUM-DEPENDENT KINASE 30 428 - -
Psa6g0808 430 Gene3D Transferase(Phosphotransferase) domain 1 205 383 - -
Psa6g0808 430 CDD STKc_CAMK 118 376 - -
Psa6g0808 430 MobiDBLite consensus disorder prediction 1 25 - -
Psa6g0808 430 SUPERFAMILY Protein kinase-like (PK-like) 118 378 IPR011009 -
Psa6g0808 430 MobiDBLite consensus disorder prediction 69 83 - -
Psa6g0808 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Psa6g0808 430 Gene3D Phosphorylase Kinase; domain 1 121 204 - -
Psa6g0808 430 MobiDBLite consensus disorder prediction 1 91 - -
Psa6g0808 430 Pfam Protein kinase domain 119 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0808 430 Gene3D - 418 428 - -
Psa6g0808 430 ProSiteProfiles Protein kinase domain profile. 119 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0808 430 Gene3D - 394 417 - -
Psa6g0808 430 SMART serkin_6 119 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0808 430 ProSitePatterns Protein kinases ATP-binding region signature. 125 152 IPR017441 GO:0005524
Psa6g0808 430 PANTHER SERINE/THREONINE-PROTEIN KINASE 30 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0808 Psa-Chr6 28223090 28227342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0808 57 430 EF-hand Containing Proteins AT3G10660 72.800 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Psa6g0808 Pkinase 8.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0808 K13412 - gmx:100783079 692.575