Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0795 ATGGATCAAAAGAAATCTAACAAAATCAGAGAAATTGTTAGACTTCAACAGATCCTTAAGAAATGGCGAAGAATCGCGAACTCATCAAAAACAACAACAACAACCACAAACAACAGCCTCACTAGAAGCAAAAGCATGAAGTTTCTGAAAAGAACACTATCTCTATCGGAACGTGAAGGAACAGCAACAACAACAACATCCTCAAACAATGGTTCTGTTCCAAAAGGTTATTTAGCAGTTTGTGTTGGAGAAGAGCTCAAGAGGTTTATTATACCGACTGAATATTTGAGTCATGAACGTTTTATGTTTCTTTTGAGAGAAGCTGAAGAAGAATTTGGGTTTCAACAAACTGGTGTTTTGAGATTTCCTTGTGAAGTTTCTGTGTTTGAGAGTGTTTTGAAGATGGTTGAAGATGGAAAGAATAATGAGAAATTGTGTAATAAAGAATGTAGATCTATTAGCATTGAAGAAATGATGGGTTATTGTTCTTTAGAAAATCAACTTGCTTGTTCTCATCATCCTCAAAGTCCATTATGTAGATAG 543 0.3481 MDQKKSNKIREIVRLQQILKKWRRIANSSKTTTTTTNNSLTRSKSMKFLKRTLSLSEREGTATTTTSSNNGSVPKGYLAVCVGEELKRFIIPTEYLSHERFMFLLREAEEEFGFQQTGVLRFPCEVSVFESVLKMVEDGKNNEKLCNKECRSISIEEMMGYCSLENQLACSHHPQSPLCR* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0795 180 Pfam Auxin responsive protein 27 136 IPR003676 GO:0009733
Psa6g0795 180 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 180 IPR003676 GO:0009733
Psa6g0795 180 PANTHER SAUR FAMILY PROTEIN 6 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0795 Psa-Chr6 27631288 27632930 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0795 1 180 Calmodulin-binding Proteins AT4G31320 50.249 1.07e-56 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0795 K14488 - gmx:100799598 227.254