Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0771 ATGGCAGTGGAACTCATGGGGTTCCCAAAATTAGATGAACAAAAAGCTATCCAAGAGGCTGCATCAGAAGGTCTCAAAGGCATGGAACACCTGATCCTAACCCTTTCTCATCAACCAACTCAATTAAACACTCAACTCACCGACCTCACCGTTTCCAAGTTCAAAAAACTCATCTCTTTACTTAACCGAACCGGTCACGCCCGGTTCAGACGAGCCCCGGTTCAACCTCCACCGGTTCAACTTCAATCCACACTTTCTTCATCTTCTCTTCCTCCTCCTCCTCCTCAACCACAGACTTCTACGCCGAAGCAGTTTCCTTCTCCGCCACCGTCACTCTCACCGCCACTTGCACCGACACCAATTTCCATCCGTCACGCGCCCTCCACCTTCCCCCAACCGCAACATCACAGTCTCACGCTCGATTTCACCAAGCCGAACGACGTCGTTCTAAGCTCAAACGCGAAAAACTCCATCGTCGAACTTGAATTCTCCAAGGACACAGCAACTTTCAGCGTTTCCTCCACTTCCTCTTTCATGTCATCCGCCATCACCGGCGACGGTAGCGTCAACGGCAAACAAGGATCCTCGATCTTCCTCAATCCAGCGGCGACACCAGCTATCTCCGGAGGAAAACCGCCTCTCTCGTCAGCACCATCAAAAAAAAGATGCCACGATCACGGCGAACACTCCGACGATGTTTCCGGCTCAAACAAATGCCACTGTGTCAAACGAAGGAAAAATAGGGTCAAGAGAACTGTGAGAGTACCGGCGATAAGTTCAAAGACAGCCGACATACCGCCGGACGAGTTCTCGTGGCGGAAATATGGGCAGAAACCGATTAAGGGTTCACCGTATCCAAGAGGTTATTACAAGTGTAGTACAGTGAGAGGGTGTCCAGCGAGGAAACACGTGGAGCGTGCACCGGATGATCCAACGATGCTGATTGTAACGTACGAGGGGGAGCACAGACACGCGATTCAAGCCGCGATGCAGGAGAACGCAGCCGGGATTGTGGGTTTGGTATTCGAGTCAACGTAA 1038 0.5154 MAVELMGFPKLDEQKAIQEAASEGLKGMEHLILTLSHQPTQLNTQLTDLTVSKFKKLISLLNRTGHARFRRAPVQPPPVQLQSTLSSSSLPPPPPQPQTSTPKQFPSPPPSLSPPLAPTPISIRHAPSTFPQPQHHSLTLDFTKPNDVVLSSNAKNSIVELEFSKDTATFSVSSTSSFMSSAITGDGSVNGKQGSSIFLNPAATPAISGGKPPLSSAPSKKRCHDHGEHSDDVSGSNKCHCVKRRKNRVKRTVRVPAISSKTADIPPDEFSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDDPTMLIVTYEGEHRHAIQAAMQENAAGIVGLVFEST* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0771 345 ProSiteProfiles WRKY domain profile. 261 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa6g0771 345 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 12 343 IPR044810 GO:0003700
Psa6g0771 345 SMART WRKY_cls 266 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa6g0771 345 PANTHER WRKY PROTEIN 12 343 - -
Psa6g0771 345 Pfam Plant zinc cluster domain 220 264 IPR018872 -
Psa6g0771 345 MobiDBLite consensus disorder prediction 208 234 - -
Psa6g0771 345 Pfam WRKY DNA -binding domain 268 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa6g0771 345 MobiDBLite consensus disorder prediction 218 234 - -
Psa6g0771 345 Gene3D WRKY domain 249 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa6g0771 345 MobiDBLite consensus disorder prediction 69 113 - -
Psa6g0771 345 MobiDBLite consensus disorder prediction 88 113 - -
Psa6g0771 345 SUPERFAMILY WRKY DNA-binding domain 262 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0771 Psa-Chr6 27085009 27086949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0771 1 344 WRKY Transcription Factor Family AT2G24570 56.497 1.26e-114 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa6g0771 WRKY 1.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0771 - - cam:101509842 496.123