Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0764 ATGGCTCATAAAAAACCATTCTTTTACATTTTCACATTCTTTATGTTGTCTATTTGTTTTGTGCCAATTTTTGGTGACACAAATGGTCAAATTTTGATAAGGTTCAAAGGCTTTTTGTCTAATAACAATGCTTTAAACAATTGGGTTGATGAGTCTAATTTATGCAATTGGTCTGGTTTGTTATGCACAAACAACAATTTTTATGGATTGAGATTAGAAAATATGGGACTTGGTGGGAAAATTGATGTAGACACATTGTTTGAATTGACAAATTTGGTTAGTTTTAGTGTCATGAATAATTCATTTGAGGGTCCAATGCCTGAATTCAAGAAGCTTGTGAAGCTAAGGGGGTTGTTTTTGTCTAATAATAAATTTTCTGGTGAGATTTTAGATAATGGTTTTGAGGGTATGGTGAATCTTAAAAGGGTATTTTTGGCAGGAAATGAGTTTAATGGTCATATTCCTTTTTCACTTGCTTCTTTGACAAGACTCTTGGATTTGGATTTGCATGATAATAGTTTTGGAGGGAACATACCAGAATTTCAACAGAATGTTTTCAGATTTTTTGATTTGTCTAATAATCAATTGGAGGGACAAATACCAATTAGCTTAAGCAATGAGCCCTTAACCTCATTTTCTGGCAATAAAGGCCTGTGTGGGAAACCTTTGAATCCATGCAACATTTCTCCAACCAAATCTATTGTGCATCCCAACTCACCTCCTTCAACTCAAGGAAATAGAAACAAACACAAAAGACTCCTTAGAGTGTTAATTGTAGTTTTGGCTATTGTTCTTTTGGCTTCAATAGTAGCACTTTTGTTTATCCAAAGCCGCCGCCGGCGACGAAGCGTAAAGCAACTCAAACCCATATTAGGGCTACAACAAAACTCTCAAAAGACTCAGAGTTTCAAGGAGACACAATCCATTGATTTAGCTGGTGATTTTAGTAAAGGTGAAAATGGAGAATTGAACTTTGTTAGGGAAGATAGAGGGAGTTTTGATTTGCAAGATCTTCTTAGGGCTTCAGCTGAAGTTCTTGGAAGTGGAAGTTTTGGATCAACTTATAAGGCCATGATTTCGAATGGACCAATTGTTGTTGTGAAGAGATTTAGGCACATGAACAATGTTGGGAAGAATGAGTTTTTTGAACACATGGAAAAGCTTGGAAGTTTGAAACATCCTAATCTACTCCCTCTTGTTGCATTCTACTACAAAAAAGAAGAAAAGTTTTTGGTTTATGATTATGGTGAAAATGGTAGCTTGGCTAGTCATCTACACGGTAGAAACGGAATTGTACTTAACTGGTCGATTCGTCTAAAAATCATAAAAGGAGTAGCAAGAGGTTTATCTCATCTCTACAAAGAGTTTCCTAAGCAAAACCTACCGCATGGTCATCTAAAATCTTCCAATGTAATCCTAAACAATTCATTTGAGCCACTTTTGACAGAATATGGACTTATACCTATGACAAACAAAAACCATGCACAACAATTCATGGCATCGTACAAATCACCAGAAGTGACACATTTTGATAGACCAAACGGAAAGACAGATATTTGGTGTCTTGGAATCCTCATTTTAGAGCTATTGACAGGAAAGTTTCCATCGAATTATCTACGACATGGAAAAGGCGGCGAGAGTTCGGATTTAGCAACATGGGTGAACTCAGTTGTGAGGGAAGAATGGACAGGTGAAGTGTTTGATAAGGATATAATGGGAACAAGAAATGGTGAAGGTGAGATGTTGAAGCTTTTGAGGATTGGAATGTTTTGTTGTGAATGGAGTGTTGAGAGGAGATTGGATTGGAAAGATGCTTTGGCTAAGATTGAAGAACTTAAGGAGAAAGATAGTGAAGATGAATCTTTTTCTTATGTTAGTGAAGGTGATTTGTATTCAAAAGGTGTGACTGATGATGATTTCTCTTTTTCTGTTGTTACTGATTCACATGTTGATAAGATTGGGAATGTGACAGACTAG 1977 0.3617 MAHKKPFFYIFTFFMLSICFVPIFGDTNGQILIRFKGFLSNNNALNNWVDESNLCNWSGLLCTNNNFYGLRLENMGLGGKIDVDTLFELTNLVSFSVMNNSFEGPMPEFKKLVKLRGLFLSNNKFSGEILDNGFEGMVNLKRVFLAGNEFNGHIPFSLASLTRLLDLDLHDNSFGGNIPEFQQNVFRFFDLSNNQLEGQIPISLSNEPLTSFSGNKGLCGKPLNPCNISPTKSIVHPNSPPSTQGNRNKHKRLLRVLIVVLAIVLLASIVALLFIQSRRRRRSVKQLKPILGLQQNSQKTQSFKETQSIDLAGDFSKGENGELNFVREDRGSFDLQDLLRASAEVLGSGSFGSTYKAMISNGPIVVVKRFRHMNNVGKNEFFEHMEKLGSLKHPNLLPLVAFYYKKEEKFLVYDYGENGSLASHLHGRNGIVLNWSIRLKIIKGVARGLSHLYKEFPKQNLPHGHLKSSNVILNNSFEPLLTEYGLIPMTNKNHAQQFMASYKSPEVTHFDRPNGKTDIWCLGILILELLTGKFPSNYLRHGKGGESSDLATWVNSVVREEWTGEVFDKDIMGTRNGEGEMLKLLRIGMFCCEWSVERRLDWKDALAKIEELKEKDSEDESFSYVSEGDLYSKGVTDDDFSFSVVTDSHVDKIGNVTD* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0764 658 Gene3D Transferase(Phosphotransferase) domain 1 417 632 - -
Psa6g0764 658 Pfam Leucine rich repeat N-terminal domain 29 62 IPR013210 -
Psa6g0764 658 SUPERFAMILY L domain-like 43 223 - -
Psa6g0764 658 Gene3D Ribonuclease Inhibitor 28 132 IPR032675 -
Psa6g0764 658 PANTHER LRR RECEPTOR-LIKE KINASE 12 622 - -
Psa6g0764 658 ProSiteProfiles Protein kinase domain profile. 340 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0764 658 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 622 - -
Psa6g0764 658 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Psa6g0764 658 Gene3D Ribonuclease Inhibitor 133 230 IPR032675 -
Psa6g0764 658 SUPERFAMILY Protein kinase-like (PK-like) 344 613 IPR011009 -
Psa6g0764 658 Gene3D Phosphorylase Kinase; domain 1 290 415 - -
Psa6g0764 658 Pfam Protein kinase domain 343 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0764 Psa-Chr6 26881243 26883817 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0764 1 642 Receptor kinase-like Gene Family AT4G31250 43.434 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Psa6g0764 Pkinase 5.6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0764 - - gmx:100781593 897.116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0764 6 26881243 26883817 Psa6g0764 6 26881243 26883817 ECH