Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0748 ATGGAAGTTTGCGCGCCTCTCAAATCCGATACTAGATTAAAGCACCGTCCTTTGACTGTTCTTAGGTTTATAAGGGGTGTGATATGCTTGGTGGTGTTTCTTTCAACAGCTTTCATGTGTTTAGTATATCTTTCGCCGCTTGCAGTTGTAGGATTGCGGCTTTTCAGCGTTCGTTATAGTAGGAAGGCAGTGTCATTCTTCTTTGGACTTTGGTTATCTATGTGGCCGTTTCTTTTCGAAAAGATAAACAAAACTAAAGTTGTGTTTTCTGGCGATAGTATTCCGATGAGGGAACGTGTGTTACTTATTGCCAATCACAGAACTGAGGTTGATTGGATGTACTTGTGGGATCTTGCGCTTCGAAAGGGAAGACTAGGATTTATAAAATATATCCTTAAGAGTAGCTTAATGAAATTGCCGATTTTCGGTTGGGGATTTCAGATTCTGGAATTCATTGCAGTGGAGAGGAAGTGGGAGATAGATGAGAAAATATTGCAACAAAATCTTTCAACATTTCAGGATCCCAAAGATCCTTTATGGCTATCTATTTTTCCTGAAGGAACCGATTATACTGAGAAGAAGTGTAAAAGCGGTCAAAAGTTTGCTGCTGAAGTTGGGCTTCCGGTGCTGACGAATGTATTACTTCCAAAAACAAAGGGGTTTCACACTTGCTTGGAAGCTCTACGAGGCTCGTTGGACGCAGTATACGACGTGACAATAGCATACAAGAATCAGTGTCCTTCCTTTCTGGACAACGTTTTTGGGCTCGATCCTTCAGAAGTACACATGCATATTCGGCGTATTCCTGTAGTTGAGATTCCAGTTTCTGAAACAAAAGCTGCTTCTTGGCTAATGAATGCATTCCAAATCAAGGACCAATTGCTCTCTGATTTCAAGATTCAAGGCCATTTCCCCAACCAACTTAATGAAGAGGGAATCTCGACCTTCAAGTGCCTTCTCACTTTGATCTTGATAGTTTCTTTTACTGCCTTGTTTACTTATTTTACATTTTTTTCTCATATCGGCTTCAAGTTGTATGTAGGTCTATCTTGTGCATATCTTTCTATTGCAACGCGCTTCAAAATTCAATTGTCGCCTTTAACAGATTATGTTCATGCATTCTATAACAACAAGAAACAAAAGAATGGATAG 1152 0.3984 MEVCAPLKSDTRLKHRPLTVLRFIRGVICLVVFLSTAFMCLVYLSPLAVVGLRLFSVRYSRKAVSFFFGLWLSMWPFLFEKINKTKVVFSGDSIPMRERVLLIANHRTEVDWMYLWDLALRKGRLGFIKYILKSSLMKLPIFGWGFQILEFIAVERKWEIDEKILQQNLSTFQDPKDPLWLSIFPEGTDYTEKKCKSGQKFAAEVGLPVLTNVLLPKTKGFHTCLEALRGSLDAVYDVTIAYKNQCPSFLDNVFGLDPSEVHMHIRRIPVVEIPVSETKAASWLMNAFQIKDQLLSDFKIQGHFPNQLNEEGISTFKCLLTLILIVSFTALFTYFTFFSHIGFKLYVGLSCAYLSIATRFKIQLSPLTDYVHAFYNNKKQKNG* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0748 383 CDD LPLAT_LCLAT1-like 76 266 - -
Psa6g0748 383 PANTHER LYSOPHOSPHATIDYL ACYLTRANSFERASE 5-RELATED 1 379 - -
Psa6g0748 383 Pfam Acyltransferase 90 243 IPR002123 GO:0016746
Psa6g0748 383 SMART plsc_2 100 222 IPR002123 GO:0016746
Psa6g0748 383 Pfam Acyltransferase C-terminus 254 321 IPR032098 -
Psa6g0748 383 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 37 244 - -
Psa6g0748 383 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 1 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0748 Psa-Chr6 26502479 26506620 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0748 1 366 Miscellaneous Gene Families AT1G75020 65.301 0.0 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0748 K13513 - gmx:100808657 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0748 6 26502479 26506620 Psa7g1211 7 89155061 89157799 ECH
Psa6g0748 6 26502479 26506620 Psa5g2116 5 164790790 164793583 ECH
Psa6g0748 6 26502479 26506620 Psa6g0748 6 26502479 26506620 ECH