Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0745 ATGAACCGGGTCAAAGAAACGAGTCGGTCCACACTTCCATATCATCACGTAAGCGCTGATTCTTCATTTCTTTTCGCCGACAGAATAACCATTTTATTTCTGTTGCTTCTACAATTCTCTTCTCACGTTTCTTTCTCTTCATCTGCATCTTTTTCTCTCCAAACTATGTCAGGATTAACCTGCAATTCCTGCAACACAGAATTCAATCATGATTCCGACCAAAAACTCCATTACAAATCCGAGTGGCATCGCTACAATCTCAAACGCAAGGTGGCTGGGGTTCCTGGAGTGACAGAAGCTTTGTTTCTAGCTAGACAATCAGCACTTGCTCAAGAGAGAGATAAATCTAATGAAACCCCTATGCTCTATAGCTGTGGCCTATGTGGCAAGGGGTATAAAAGTGCTAAGGCTCATGCGGAGCATCTGAAGTCGAGAACTCACATGGTTCGGGCTTCTGAAGGAGCTAGTGATTCAGATGGGAAAGCTATAATTAAGCCACTTCCACCACGCGTTGTGAATAAGCCGCCTCCTAGAAGATTGGTAGATGACTCTGTTGAAGATGAAGACAGTGAAGATGAATGGGAGGAGGTTGATTCTGATGATCTGATGGATGATGCTGAGAAGTCCTTGGCAGATTTGAACATGGATGAGAATGCTGATATGGATGAAGATGATGTTGTGGACATAGATCCATCTTGTTGCTTTATGTGTGATCACAAGCACAAAACAATTGAAAACTGCATGGTTCACATGCACAAGCATCATGGATTCTTCATTCCTGACGTTGAGTATTTGAAAGATCCAAAGGGGCTCCTCACTTATCTTGGTCTAAAGGTCAAAAGGGACTACTTGTGTCTGTACTGTAACGATAGGTGTCATCCTTTTAGCAGCTTGGAAGCAGTCAGGAAACATATGGTTGCAAAAAATCACTGTAAAGTGCATTATGGTGATGATGATGAGGAGGAGGAAGTAGAGCTGGAAGAATTCTATGATTATACCAGCAGTTATGTTGATGATCAAGGGAAGCAGCTAGTTGCATCCGGTGATGCTGATAATAATATAGAACTTAGTGGTGGGTCTGAGCTCGTAATCACTAAGATGTCTGGTGATAGAAAATCGACCAGAACTCTTGGTTCCCGCGAATATTTGCGTTATTATCGTCAGAAACCAAGGCCATCTCCAGCTAACAACATTGCCATTACTGCTGAATTGGCTTCAAGGTACAGGAGCATGGGTTTGGCCACTGTCCAATCAAGGGAGCAACTTGTGAGAATGAAAGTGTTGAAGCAGATGAACAAATCGGGTGTGGAGCATATGCGTAGCAAGATGGGGATGAAGAGTAATGTCATCCGGAACTTGCCAAACAATGTCACATATTAG 1380 0.4297 MNRVKETSRSTLPYHHVSADSSFLFADRITILFLLLLQFSSHVSFSSSASFSLQTMSGLTCNSCNTEFNHDSDQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQSALAQERDKSNETPMLYSCGLCGKGYKSAKAHAEHLKSRTHMVRASEGASDSDGKAIIKPLPPRVVNKPPPRRLVDDSVEDEDSEDEWEEVDSDDLMDDAEKSLADLNMDENADMDEDDVVDIDPSCCFMCDHKHKTIENCMVHMHKHHGFFIPDVEYLKDPKGLLTYLGLKVKRDYLCLYCNDRCHPFSSLEAVRKHMVAKNHCKVHYGDDDEEEEVELEEFYDYTSSYVDDQGKQLVASGDADNNIELSGGSELVITKMSGDRKSTRTLGSREYLRYYRQKPRPSPANNIAITAELASRYRSMGLATVQSREQLVRMKVLKQMNKSGVEHMRSKMGMKSNVIRNLPNNVTY* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0745 459 SUPERFAMILY beta-beta-alpha zinc fingers 219 293 IPR036236 -
Psa6g0745 459 ProSitePatterns Zinc finger C2H2 type domain signature. 61 83 IPR013087 -
Psa6g0745 459 MobiDBLite consensus disorder prediction 143 199 - -
Psa6g0745 459 ProSiteProfiles Zinc finger C2H2 type domain profile. 123 147 IPR013087 -
Psa6g0745 459 SUPERFAMILY beta-beta-alpha zinc fingers 56 91 IPR036236 -
Psa6g0745 459 ProSitePatterns Zinc finger C2H2 type domain signature. 125 147 IPR013087 -
Psa6g0745 459 PANTHER ZINC FINGER PROTEIN 622 56 459 IPR040025 -
Psa6g0745 459 Pfam C2H2 type zinc-finger (2 copies) 234 335 IPR041661 -
Psa6g0745 459 PANTHER ZINC FINGER PROTEIN-RELATED 56 459 - -
Psa6g0745 459 MobiDBLite consensus disorder prediction 185 199 - -
Psa6g0745 459 SMART c2h2final6 123 147 IPR013087 -
Psa6g0745 459 SMART c2h2final6 283 310 IPR013087 -
Psa6g0745 459 SMART c2h2final6 59 83 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0745 Psa-Chr6 26253512 26256232 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0745 56 459 C2H2 Transcription Factor Family AT4G31420 62.410 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0745 K14816 - gmx:100796317 616.305