Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0744 ATGAGCAGCATCAACCTTGAAGAAATAAGAAACGAGAATGTCAATTTGGAACGGATTCCGATAGAAGAAGTGTTTGAGCAGCTGAAATGTTCGAGAGAAGGTCTTTCATCAGAGGAAGGATCCAACAGGCTTCAAGTCTTTGGACCGAACAAGCTGGAAGAGGTGGAAGATAACAAGATTTTGAAGTTTCTGGGATTTATGTGGAACCCTTTGTCATGGGTTATGGAAGCTGCTGCTATCATGGCCATTGCTTTGGCTAATGGAGGTGGAAAGCCTCCAGATTGGCAAGATTTTGTTGGAATCATTGTTCTCTTGGTCATCAATTCCACCATCAGTTTCATCGAAGAAAACAACGCCGGTAACGCGGCCGCCGCTCTCATGGCTGGTTTAGCTCCCAAAGCCAAGGTACTAAGAGATGGTAAATGGGGTGAACAAGATGCTGCAATTCTAGTACCAGGAGACATAATCAGCATCAAGTTAGGAGACATCATTCCGGCCGATGCGCGTCTTCTCGAGGGAGATCCTTTAAGTGTTGATCAATCTGCTTTAACAGGAGAATCTCTTCCTGTCACAAAGGGTGCAACTCAAGAAGTGTTTTCAGGATCGACCGTTAAGAAGGGTGAGATCGAAGCGATTGTGTATGCAACTGGTGTACACACGTTTTTCGGTAAGGCGGCTCATTTGGTTGATAGTACTAATCAAGTCGGACATTTTCAGCAAGTGCTTACCGCTATCGGAAATTTCTGCATTTGTTCGATTGCTGTTGGAATAGTCATTGAACTCATTGTGATGTACCCGATTCAGCATCGCAAGTATAGAGACGGGATTGATAATCTTTTGGTGCTTTTGATCGGAGGAATTCCGATTGCGATGCCAACTGTTTTGTCTGTTACTATGGCTATTGGTTCTCATAAGCTTTCAGAGCAAGGTGCAATTACAAAGAGAATGACTGCTATTGAAGAAATGGCTGGCATGGATGTTCTTTGCAGTGATAAAACTGGAACTCTCACTTTGAATAAACTTAGTGTTGATAAAAACTTGATTGAAGTGTTTGCTGGGGGAATGGATAAGGATTTGGTGATACTCTTAGCAGCAAGAGCTTCTAGGATTGAAAACCAGGATGCTATAGATGCTGCCATTGTTGGAATGCTGTCTGATCCACAAGAGGCTAGAGCTGATATCAATGAGGTCCATTTTTTGCCGTTCAATCCCGTTGATAAGAGGACTGCTCTTACCTATGTTGATTCTGACGGAAATTGGCATAGAGCTAGCAAAGGTGCTCCTGAGCAGATATTGGATCTTTGTGACTGCAAAGAGAATGTGAGGAGAAGTGTTCATGCAATGATTGACAGGTTTGCGGAGCGTGGACTTCGATCATTAGGTGTTGCTTGTCAGGAAGTACCTGAGAGAACAAAAGAGAGTCCTGGTGCACCATGGCAATTTGTTGGTTTGTTGCCACTATTTGATCCTCCTAGACATGATAGTGCTGACACAATTCGAGAGGCTCTTAATCTTGGTGTGAATGTTAAGATGATCACAGGGGACCAGCTTGCCATTGGAAAGGAAACAGGTAGAAGGCTTGGAATGGGAACAAACATGTATCCCTCATCTGCATTGCTTGGTCAGGATAAAGATGCTTCGGATATTCCTATTGACGAGTTGATTGAAAAGGCCGATGGATTTGCAGGAGTATTTCCAGAACACAAGTATGAAATTGTCAAGAGGCTGCAAGAAAGAAAGCACATATGCGGAATGACAGGAGATGGCGTAAACGATGCTCCTGCGTTAAAGAGAGCCGATATCGGAATTGCTGTTGCTGACGCTACAGATGCTGCTAGAAGTGCTTCTGATATTGTCCTCACTGAACCTGGTTTGAGTGTCATTATCAGTGCTGTGCTCACCAGCAGGGCCATTTTCCAGAGGATGAAGAATTATACTATTTATGCCGTGTCAATCACCATCCGTATTGTGTTCGGTTTCATGTTCATTGCTTTGATTTGGAAATTTGATTTTGCACCTTTCATGGTTTTGATCATTGCAATACTGAATGATGGTACCATTATGACAATTTCAAAAGATAGAGTGAAACCATCTCCACTGCCTGACAGTTGGAAACTAAAGGAAATATTTGCAACTGGTATTGTTCTCGGCAGTTACATGGCACTAACAACTGTCATATTTTTTTGGGCCATGCATGATACCGACTTTTTCTCGGACAAGTTTGGTGTGAGGCCTTTGAGACATAGTCCTAATGAGATGATGGCAGCTCTATATCTACAAGTTAGTATAATAAGTCAGGCACTTATTTTTGTAACTAGGTCTCAAAGATGGTCTCTCGGCGAAATACCCGGTTTTCTCCTTGTAGGCGCTTTCTTCATTGCTCAACTGATTGCAACTTTAATAGCAGTGTATGCTGATTGGAAATTTGCAAGAATAAATGGAATGGGATGGGGTTGGGCCGGCGTAATTTGGTTGTACAGTTTGGTAACCTATCCTCCTCTTGATTTACTCAAGTTCGCAATCCGATATATTCTAAGTGGAAATGCGTGGAACACTCTTTTCGAAAACAGGACTGCTTTCACTTCAAAGAAAGACTATGGCAGAGAAGAAAGGGAAGCACATTGGGCCTCAGCACATAGATCAGCAAATGGTCTTCAGCCTGCTGTCTCCAAACTTTTCAATGAAAATACTAGCTATAGAGAGCTCTCAGAGATAGCGGAACAAGCCAGGAAACGCGCTGAAGTTGCAAGGATTATGGAGCAGAATACTCTGAAGGGTCGCGTTGAGTCGGCAGCAAAGCTTAAGGGACTTCACCTTGATACAAATAAGCAGAATTATACCATTTAA 2847 0.4289 MSSINLEEIRNENVNLERIPIEEVFEQLKCSREGLSSEEGSNRLQVFGPNKLEEVEDNKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWGEQDAAILVPGDIISIKLGDIIPADARLLEGDPLSVDQSALTGESLPVTKGATQEVFSGSTVKKGEIEAIVYATGVHTFFGKAAHLVDSTNQVGHFQQVLTAIGNFCICSIAVGIVIELIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSEQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAGGMDKDLVILLAARASRIENQDAIDAAIVGMLSDPQEARADINEVHFLPFNPVDKRTALTYVDSDGNWHRASKGAPEQILDLCDCKENVRRSVHAMIDRFAERGLRSLGVACQEVPERTKESPGAPWQFVGLLPLFDPPRHDSADTIREALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDASDIPIDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGSYMALTTVIFFWAMHDTDFFSDKFGVRPLRHSPNEMMAALYLQVSIISQALIFVTRSQRWSLGEIPGFLLVGAFFIAQLIATLIAVYADWKFARINGMGWGWAGVIWLYSLVTYPPLDLLKFAIRYILSGNAWNTLFENRTAFTSKKDYGREEREAHWASAHRSANGLQPAVSKLFNENTSYRELSEIAEQARKRAEVARIMEQNTLKGRVESAAKLKGLHLDTNKQNYTI* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0744 948 Gene3D - 897 948 - -
Psa6g0744 948 Gene3D - 341 488 IPR023299 GO:0000166
Psa6g0744 948 SFLD p-type atpase 311 637 IPR044492 -
Psa6g0744 948 PRINTS P-type cation-transporting ATPase superfamily signature 179 193 - -
Psa6g0744 948 PRINTS P-type cation-transporting ATPase superfamily signature 329 343 - -
Psa6g0744 948 PRINTS P-type cation-transporting ATPase superfamily signature 483 494 - -
Psa6g0744 948 PRINTS P-type cation-transporting ATPase superfamily signature 505 515 - -
Psa6g0744 948 PRINTS P-type cation-transporting ATPase superfamily signature 586 605 - -
Psa6g0744 948 PRINTS P-type cation-transporting ATPase superfamily signature 609 621 - -
Psa6g0744 948 Pfam Cation transporter/ATPase, N-terminus 19 81 IPR004014 -
Psa6g0744 948 Gene3D - 94 813 - -
Psa6g0744 948 SUPERFAMILY HAD-like 325 633 IPR036412 -
Psa6g0744 948 Pfam haloacid dehalogenase-like hydrolase 325 600 - -
Psa6g0744 948 SMART Cation_ATPase_N_a_2 15 87 IPR004014 -
Psa6g0744 948 ProSitePatterns E1-E2 ATPases phosphorylation site. 331 337 IPR018303 -
Psa6g0744 948 SFLD Haloacid Dehalogenase 311 637 - -
Psa6g0744 948 PANTHER CALCIUM-TRANSPORTING ATPASE 1 928 - -
Psa6g0744 948 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 845 IPR023298 -
Psa6g0744 948 PANTHER PLASMA MEMBRANE ATPASE 1 928 - -
Psa6g0744 948 Gene3D - 326 623 IPR023214 -
Psa6g0744 948 PRINTS H+-transporting ATPase (proton pump) signature 445 463 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa6g0744 948 PRINTS H+-transporting ATPase (proton pump) signature 558 574 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa6g0744 948 PRINTS H+-transporting ATPase (proton pump) signature 586 602 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa6g0744 948 PRINTS H+-transporting ATPase (proton pump) signature 617 642 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa6g0744 948 PRINTS H+-transporting ATPase (proton pump) signature 758 779 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa6g0744 948 Gene3D - 132 216 - -
Psa6g0744 948 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 34 804 IPR006534 GO:0008553|GO:0016021|GO:0120029
Psa6g0744 948 CDD P-type_ATPase_H 34 839 IPR006534 GO:0008553|GO:0016021|GO:0120029
Psa6g0744 948 Pfam E1-E2 ATPase 131 308 - -
Psa6g0744 948 SUPERFAMILY Calcium ATPase, transduction domain A 132 229 IPR008250 -
Psa6g0744 948 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 561 676 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa6g0744 948 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 101 348 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0744 Psa-Chr6 26176814 26182657 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0744 2 948 Primary Pumps ATPases AT2G07560 79.536 0.0 1546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0744 K01535 - gmx:100791692 1607.04