Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0743 ATGCCAACTGTTTTGTCTGTTACTGTGGCTATTGGCTCTCATAGGCTTTCACAACGAGGTGAGATTACAAAGAGAATGACTGCTATTGAAGAAATGGCTGGAATGGATGTTTTTTGTAGTGATAAATCCGGAACTCTCACTTTGAATAAACTTAGTGTTGATAGAAACTTGATTGAAGTGTTTGCTAGGGGAATTGATAAGGATATGGTGATACTTTTAGCAGCAAGAGCTTATAGGATAGAAAATCAGGATGTTATAGATGCTGCTATTGTTGGAATGCTTTCTGATCCATAA 294 0.3707 MPTVLSVTVAIGSHRLSQRGEITKRMTAIEEMAGMDVFCSDKSGTLTLNKLSVDRNLIEVFARGIDKDMVILLAARAYRIENQDVIDAAIVGMLSDP* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0743 97 Gene3D - 1 35 - -
Psa6g0743 97 PANTHER PLASMA MEMBRANE ATPASE 1 97 - -
Psa6g0743 97 PANTHER CALCIUM-TRANSPORTING ATPASE 1 97 - -
Psa6g0743 97 Gene3D - 51 96 IPR023299 GO:0000166
Psa6g0743 97 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 34 IPR023298 -
Psa6g0743 97 Gene3D - 36 50 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0743 Psa-Chr6 26166743 26167036 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0743 1 97 Primary Pumps ATPases AT3G47950 81.443 3.06e-50 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0743 K01535 - csin:114262980 165.622