Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0742 ATGGAAACTACTACTATCACATGCATTTCTCTGGCTAATGGAAGTGGAAGGCCTCCAAATTATCAAGATTTTGTTGGAATCATTGCTCTTTTGGTCATCAACTCCACTATCAGTTTCATCATAGAAAACAATGACGGTAACGCCACCGCTGCTCTCATGGTTGGTTTAGCTCCAAAGGCCAAG 183 0.4208 METTTITCISLANGSGRPPNYQDFVGIIALLVINSTISFIIENNDGNATAALMVGLAPKAK 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0742 61 PANTHER CALCIUM-TRANSPORTING ATPASE 1 61 - -
Psa6g0742 61 Gene3D - 1 61 - -
Psa6g0742 61 PANTHER PLASMA MEMBRANE ATPASE 1 61 - -
Psa6g0742 61 SUPERFAMILY Calcium ATPase, transmembrane domain M 8 53 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0742 Psa-Chr6 26166015 26166197 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0742 1 61 Primary Pumps ATPases AT2G07560 70.492 1.48e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0742 K01535 - gmx:100794372 93.2041