Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0699 ATGAATAAAGAAAATGTGGAGAATGTTAGGGTGACTCGAGCAAGGGCTAGAGCCATGAAAGCCTCTTCAACAAAGGAACCAGCTATGGTTGGACTAAGGGATGTGACTAACATTTCAACAAAATCATCGCACAATAATAAGCGTCTTCATACGTCAAATTTGCAGAAGAATGAAGTTTGTAAGAAGAGAAAGACCAAGGTAGCTTCAGAAGATAATGCCTACTTACAAGTTTTGACAACCAAAGAGAATGCTCAGACGGAGTTGGCTAAAGATTCTTCAACATCAGCAATAACAATGAAAGATTCACTGCAACTGAAAGTTCAACCTTATCTGGTTGTTCCCATGCTTTCAATGCAGGACTCTGTCAAGTCTCCAATTGAAGATATAAATCTGATATGTGAGAAACTAAGAACCTCAGTTGGCTTTGGAGTTGTGGACATTGATTCGGAGGCAAAGGATTCTCTTGTTTGGACTTCTTATGCTCCTGATATATACTATAATATTCATGTCAGAGAGTGTGAAAGGAGGGCACTAGCCGATTACATGGAAAAGGTGCAGCGGGATATCACTCCAACCATGCGGGGAATTCTGGTCGATTGGCTTGTGGAGGTTTCTGATGAATATAAACTAGTTCCAGACACACTCTACCTTACAGTGAATCTCATTGATCGATTCCTTTCCTGTCGCGTGATTACAAGGCAGAGGCTCCAGTTGCTTGGTGTTACTTGCATGCTGATTTCATCTAAGTATGAAGAGATCTGTGCTCCCCGACTAGAAGAATTTGTCACCATCACAGATAATACATACTCGAAAAAAGAGATGTTGAAAATGGAGAAAGAGGTACTGAATGTTCTGCAGTTCCAATTATCTGTTCCTACAATCAAAACATTTCTCAGGAGGTTCATCCAAGCAGCACAATCTTCTTACAAGGCTGCTTATCCTGAACTGGAATTCATGGCAAATTATTTAGCAGAGCTTACACTTGTTGAATACAGCTTCTTGCAGTTTCGACCTTCCAAGATAGCTGCATCTGCAGTTTTTCTCGCCAGATGGACCCTCGGCCAGTCAGAACATCCATGGAATCCGACTCTTGAGCACTATACAAACTACAAAGCATCAGAGCTTAAAACCACTGTCCTTGCACTGCTCGATTTGCAACTTAACAATACCAAAGGCTGTGGTCTGAATGGTGTCCGCGACAAATATAAACAACAGACGTTCAAGAGTGTGGCAAATTTTTCTCCGAAACCGGTGGAACCTCTTTTCTAG 1269 0.4153 MNKENVENVRVTRARARAMKASSTKEPAMVGLRDVTNISTKSSHNNKRLHTSNLQKNEVCKKRKTKVASEDNAYLQVLTTKENAQTELAKDSSTSAITMKDSLQLKVQPYLVVPMLSMQDSVKSPIEDINLICEKLRTSVGFGVVDIDSEAKDSLVWTSYAPDIYYNIHVRECERRALADYMEKVQRDITPTMRGILVDWLVEVSDEYKLVPDTLYLTVNLIDRFLSCRVITRQRLQLLGVTCMLISSKYEEICAPRLEEFVTITDNTYSKKEMLKMEKEVLNVLQFQLSVPTIKTFLRRFIQAAQSSYKAAYPELEFMANYLAELTLVEYSFLQFRPSKIAASAVFLARWTLGQSEHPWNPTLEHYTNYKASELKTTVLALLDLQLNNTKGCGLNGVRDKYKQQTFKSVANFSPKPVEPLF* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0699 422 Pfam Cyclin, C-terminal domain 292 415 IPR004367 -
Psa6g0699 422 SMART cyclin_7 296 384 IPR013763 -
Psa6g0699 422 SMART cyclin_7 199 283 IPR013763 -
Psa6g0699 422 Gene3D - 163 412 - -
Psa6g0699 422 ProSitePatterns Cyclins signature. 194 225 IPR006671 -
Psa6g0699 422 SMART Cyclin_C_2 292 416 IPR004367 -
Psa6g0699 422 CDD CYCLIN 290 383 IPR013763 -
Psa6g0699 422 PANTHER CYCLIN-A2-4 31 422 - -
Psa6g0699 422 SUPERFAMILY Cyclin-like 153 289 IPR036915 -
Psa6g0699 422 Gene3D - 177 290 - -
Psa6g0699 422 CDD CYCLIN 193 282 IPR013763 -
Psa6g0699 422 Pfam Cyclin, N-terminal domain 163 290 IPR006671 -
Psa6g0699 422 PIRSF Cyclin_A_B_D_E 1 420 IPR039361 -
Psa6g0699 422 SUPERFAMILY Cyclin-like 291 415 IPR036915 -
Psa6g0699 422 PANTHER CYCLINS 31 422 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0699 Psa-Chr6 24080518 24088044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0699 10 414 Core Cell Cycle Gene Families AT1G80370 50.728 4.11e-131 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0699 K06627 - gmx:100777132 495.738